RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ZFXP17010 805 aaPredicted RBP18.16■□□□□ 0.5
SDCBP-202ENST00000413219 PDE1CQ14123 709 aaPredicted RBP18.16■□□□□ 0.5
SDCBP-202ENST00000413219 CDO1Q16878 200 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 FSCBQ5H9T9 825 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 OGFRL1Q5TC84 451 aaPredicted RBP18.16■□□□□ 0.5
SDCBP-202ENST00000413219 ATF7IP2Q5U623 682 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 C16orf46Q6P387 395 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 POTEAQ6S8J7 498 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 UGT2A3Q6UWM9 527 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 PACS1Q6VY07 963 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 KBTBD6Q86V97 674 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 C1orf127Q8N9H9 656 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 RNF149Q8NC42 400 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 C12orf42Q96LP6 360 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 KCNK16Q96T55 309 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 RPF1Q9H9Y2 349 aaKnown RBP18.16■□□□□ 0.5
SDCBP-202ENST00000413219 AS3MTQ9HBK9 375 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 GBA2Q9HCG7 927 aaPredicted RBP18.16■□□□□ 0.5
SDCBP-202ENST00000413219 KIAA1257Q9ULG3 409 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 ACKR2O00590 384 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 PDE5AO76074 875 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 SRGAP2CP0DJJ0 459 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 CCDC130P13994 396 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 GRIA2P42262 883 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 NR2C2P49116 596 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 MTTPP55157 894 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 DLG1Q12959 904 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 TRIP10Q15642 601 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 LRRC36Q1X8D7 754 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 LCLAT1Q6UWP7 414 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 ICA1LQ8NDH6 482 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 HEXIM2Q96MH2 286 aaKnown RBP18.16■□□□□ 0.5
SDCBP-202ENST00000413219 MMP19Q99542 508 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 TRIM56Q9BRZ2 755 aaKnown RBP18.16■□□□□ 0.5
SDCBP-202ENST00000413219 SNRNP25Q9BV90 132 aaKnown RBP18.16■□□□□ 0.5
SDCBP-202ENST00000413219 VPS33BQ9H267 617 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 XPNPEP3Q9NQH7 507 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 GPATCH2LQ9NWQ4 482 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 ATXN10Q9UBB4 475 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 ARHGAP26Q9UNA1 814 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 H3BNX3 289 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 TPP1O14773 563 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 CREB3O43889 395 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 FARP2O94887 1054 aaPredicted RBP18.15■□□□□ 0.5
SDCBP-202ENST00000413219 RAG1P15918 1043 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 DESP17661 470 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 UBA1P22314 1058 aaKnown RBP18.15■□□□□ 0.5
SDCBP-202ENST00000413219 SERPINB6P35237 376 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 ABCE1P61221 599 aaKnown RBP18.15■□□□□ 0.5
SDCBP-202ENST00000413219 MAP7Q14244 749 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 LRRC23Q53EV4 343 aaPredicted RBP18.15■□□□□ 0.5
SDCBP-202ENST00000413219 SCYL2Q6P3W7 929 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 DEFB107AQ8IZN7 70 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 MARVELD2Q8N4S9 558 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 UBA3Q8TBC4 463 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 QKIQ96PU8 341 aaKnown RBP eCLIP18.15■□□□□ 0.5
SDCBP-202ENST00000413219 RTKNQ9BST9 563 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 MYOZ2Q9NPC6 264 aa18.15■□□□□ 0.5
SDCBP-202ENST00000413219 C6orf203Q9P0P8 240 aaPredicted RBP18.15■□□□□ 0.5
SDCBP-202ENST00000413219 DENRO43583 198 aaKnown RBP18.14■□□□□ 0.5
SDCBP-202ENST00000413219 VAV1P15498 845 aa18.14■□□□□ 0.5
SDCBP-202ENST00000413219 KCNA4P22459 653 aa18.14■□□□□ 0.5
SDCBP-202ENST00000413219 TBL3Q12788 808 aaKnown RBP18.14■□□□□ 0.5
SDCBP-202ENST00000413219 TTC39CQ8N584 583 aa18.14■□□□□ 0.5
SDCBP-202ENST00000413219 FAM81AQ8TBF8 368 aa18.14■□□□□ 0.5
SDCBP-202ENST00000413219 AFG1LQ8WV93 481 aa18.14■□□□□ 0.5
SDCBP-202ENST00000413219 TFB1MQ8WVM0 346 aaKnown RBP18.14■□□□□ 0.5
SDCBP-202ENST00000413219 FZD8Q9H461 694 aa18.14■□□□□ 0.5
SDCBP-202ENST00000413219 IFT122Q9HBG6 1241 aa18.14■□□□□ 0.5
SDCBP-202ENST00000413219 PNPOQ9NVS9 261 aa18.14■□□□□ 0.5
SDCBP-202ENST00000413219 MORF4L1Q9UBU8 362 aa18.14■□□□□ 0.5
SDCBP-202ENST00000413219 TMCO1Q9UM00 188 aa18.14■□□□□ 0.5
SDCBP-202ENST00000413219 IGKV6-21A0A0C4DH24 114 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 COX4I1P13073 169 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 MX2P20592 715 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 CYP2F1P24903 491 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 FDFT1P37268 417 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 RGS2P41220 211 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 INCA1Q0VD86 236 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 STILQ15468 1287 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 CA9Q16790 459 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 PABPC1LQ4VXU2 614 aaKnown RBP18.14■□□□□ 0.49
SDCBP-202ENST00000413219 METTL21CQ5VZV1 264 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 SPATA24Q86W54 205 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 TMEM126BQ8IUX1 230 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 C10orf107Q8IVU9 208 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 ZNF280CQ8ND82 737 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 PIWIL1Q96J94 861 aaKnown RBP18.14■□□□□ 0.49
SDCBP-202ENST00000413219 NGRNQ9NPE2 291 aaKnown RBP18.14■□□□□ 0.49
SDCBP-202ENST00000413219 ZNF277Q9NRM2 450 aaPredicted RBP18.14■□□□□ 0.49
SDCBP-202ENST00000413219 COPG2Q9UBF2 871 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 BARX2Q9UMQ3 279 aaPredicted RBP18.14■□□□□ 0.49
SDCBP-202ENST00000413219 PSMD13Q9UNM6 376 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 ANK1P16157 1881 aa18.14■□□□□ 0.49
SDCBP-202ENST00000413219 PRKCGP05129 697 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 NFICP08651 508 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 CXCL8P10145 99 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 RALBP11234 206 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 SDC4P31431 198 aa18.13■□□□□ 0.49
SDCBP-202ENST00000413219 OSTNP61366 133 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms