RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ZFPL1O95159 310 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 KCNA3P22001 575 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 ABCD1P33897 745 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 GGT5P36269 586 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 MMP14P50281 582 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 NLRP5P59047 1200 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 FAM189BP81408 668 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 RESTQ13127 1097 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 TUBB3Q13509 450 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 SCARB2Q14108 478 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 KCNAB1Q14722 419 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 GEN1Q17RS7 908 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 ZNF750Q32MQ0 723 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 ARHGAP40Q5TG30 622 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 SP5Q6BEB4 398 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-204ENST00000412061 NAA16Q6N069 864 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-204ENST00000412061 MRNIPQ6NTE8 343 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 KCTD20Q7Z5Y7 419 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 SPARTQ8N0X7 666 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 TAGAPQ8N103 731 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 ADSSL1Q8N142 457 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 GALNT4Q8N4A0 578 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 SRBD1Q8N5C6 995 aaKnown RBP4.93□□□□□ -1.62
BRCA1-204ENST00000412061 TBC1D5Q92609 795 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 PPP2R3CQ969Q6 453 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 SNX21Q969T3 373 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 C8orf49Q96NF6 230 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 CDK5RAP1Q96SZ6 601 aaKnown RBP4.93□□□□□ -1.62
BRCA1-204ENST00000412061 SEZ6LQ9BYH1 1024 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 OR10A4Q9H209 315 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 CXorf36Q9H7Y0 433 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 ZBTB26Q9HCK0 441 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 MRPS17Q9Y2R5 130 aaKnown RBP4.93□□□□□ -1.62
BRCA1-204ENST00000412061 MAP3K2Q9Y2U5 619 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 TESMINQ9Y4I5 508 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 PCDHGB5Q9Y5G0 923 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 TRGV11A0A075B6L2 103 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 FAM90A18PA6NE21 464 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 FAM90A16PA6NEW6 464 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 FAM90A9PA6NNJ1 464 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 FAM90A5PA8MXJ8 464 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 SRGAP2O75044 1071 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 TBCAO75347 108 aaKnown RBP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 CDKL5O76039 1030 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 NDUFA10O95299 355 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 PGM3O95394 542 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 BAG2O95816 211 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 F9P00740 461 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 FAM90A15PP0C7V4 464 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 FAM90A14PP0C7W9 464 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 FAM200BP0CF97 657 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 LAMP2P13473 410 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 DDX6P26196 483 aaKnown RBP eCLIP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 SERPINA4P29622 427 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 PSMC2P35998 433 aaKnown RBP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 ATP6V1E1P36543 226 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 BMPR1AP36894 532 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 NNMTP40261 264 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 HADHAP40939 763 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 PIK3CAP42336 1068 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 VAV2P52735 878 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 CTSWP56202 376 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 PRPF4BQ13523 1007 aaKnown RBP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 GRM4Q14833 912 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 R3HDM1Q15032 1099 aaKnown RBP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 SEC23BQ15437 767 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 TMEM266Q2M3C6 531 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 BEAN1Q3B7T3 259 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 RBM20Q5T481 1227 aaKnown RBP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 TTC22Q5TAA0 569 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 GPR139Q6DWJ6 353 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 RGS7BPQ6MZT1 257 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 ZNF449Q6P9G9 518 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 LRRC8DQ7L1W4 858 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 SZRD1Q7Z422 152 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 C1orf210Q8IVY1 113 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 SLC15A3Q8IY34 581 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 CEP57L1Q8IYX8 460 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 CARNMT1Q8N4J0 409 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 AVL9Q8NBF6 648 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 KCTD6Q8NC69 237 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 CPEB3Q8NE35 698 aaKnown RBP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 TOR1AIP2Q8NFQ8 470 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 GOT1L1Q8NHS2 421 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 MGARPQ8TDB4 240 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 CPT1BQ92523 772 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 NACC2Q96BF6 587 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 GRAMD1AQ96CP6 724 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 TBC1D31Q96DN5 1066 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 FAM120BQ96EK7 910 aaKnown RBP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 FEM1CQ96JP0 617 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 ZNF668Q96K58 619 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 FTOQ9C0B1 505 aaKnown RBP eCLIP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 ZNF703Q9H7S9 590 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-204ENST00000412061 INTS13Q9NVM9 706 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 SMPD4Q9NXE4 827 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 PASKQ96RG2 1323 aa4.92□□□□□ -1.62
BRCA1-204ENST00000412061 AGAP14A8MT82 685 aa4.91□□□□□ -1.62
BRCA1-204ENST00000412061 FER1L4A9Z1Z3 1794 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms