RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 TTC39CQ8N584 583 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 MINDY1Q8N5J2 469 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 SLC35F5Q8WV83 523 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 SMARCE1Q969G3 411 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 PLD4Q96BZ4 506 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 TOE1Q96GM8 510 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 CAMK1GQ96NX5 476 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 CDK5RAP1Q96SZ6 601 aaKnown RBP17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 RMND1Q9NWS8 449 aa17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 TP53BP1Q12888 1972 aaPredicted RBP17.24■□□□□ 0.35
SCAMP4-203ENST00000411971 DMXL2Q8TDJ6 3036 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 NYNRINQ9P2P1 1898 aaKnown RBP17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 PPP1R3GB7ZBB8 358 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 VDRP11473 427 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 SLC6A4P31645 630 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 HOXD12P35452 270 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 BNC1Q01954 994 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 LRRC63Q05C16 580 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 TMEM270Q6UE05 265 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 LCLAT1Q6UWP7 414 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 ANKS1BQ7Z6G8 1248 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 TMPRSS6Q8IU80 811 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 ARHGAP18Q8N392 663 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 DDI1Q8WTU0 396 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 CYB5D2Q8WUJ1 264 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 KCTD13Q8WZ19 329 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 TSG101Q99816 390 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 SCNM1Q9BWG6 230 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 FAM124BQ9H5Z6 455 aaPredicted RBP17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 PRDM16Q9HAZ2 1276 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 LRRC4Q9HBW1 653 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 ITM2CQ9NQX7 267 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 STOML2Q9UJZ1 356 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 STRIP2Q9ULQ0 834 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 PLXNB3Q9ULL4 1909 aa17.23■□□□□ 0.35
SCAMP4-203ENST00000411971 ARHGAP33O14559 1287 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 HYAL3O43820 417 aaPredicted RBP17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 GADD45BO75293 160 aaPredicted RBP17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 FYNP06241 537 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 NCAM1P13591 858 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 CD6P30203 668 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 TPMTP51580 245 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 PTPRNQ16849 979 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 NADSYN1Q6IA69 706 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 RFWD3Q6PCD5 774 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 RRAGAQ7L523 313 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 METTL3Q86U44 580 aaKnown RBP17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 ADIPOR2Q86V24 386 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 GATA6Q92908 595 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 KREMEN1Q96MU8 473 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 GPR174Q9BXC1 333 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 CIPCQ9C0C6 399 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 MTG2Q9H4K7 406 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 PCDHB4Q9Y5E5 795 aa17.22■□□□□ 0.35
SCAMP4-203ENST00000411971 PLXNA2O75051 1894 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 IGLV3-27P01718 113 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 PROS1P07225 676 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 ZNF132P52740 706 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 GFPT1Q06210 699 aaPredicted RBP17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 FAM133BQ5BKY9 247 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 KLHL10Q6JEL2 608 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 MSANTD2Q6P1R3 559 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 UNQ6494/PRO21346Q6UXR6 183 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 KIAA0907Q7Z7F0 614 aaPredicted RBP17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 RGL4Q8IZJ4 473 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 SCML4Q8N228 414 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 CEP76Q8TAP6 659 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 LMLNQ96KR4 655 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 TIGD1Q96MW7 591 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 HESX1Q9UBX0 185 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 KLK13Q9UKR3 277 aa17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 HBS1LQ9Y450 684 aaKnown RBP17.21■□□□□ 0.35
SCAMP4-203ENST00000411971 PTPRBP23467 1997 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 FREM2Q5SZK8 3169 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 UPK3BL1B0FP48 263 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 UPK3BL2E5RIL1 263 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 BIN1O00499 593 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 NDUFS2O75306 463 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 SMC2O95347 1197 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 EPHX1P07099 455 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 SETSIPP0DME0 302 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 CD70P32970 193 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 STX17P56962 302 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 SIM1P81133 766 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 MPPE1Q53F39 396 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 PPM1KQ8N3J5 372 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 C1orf216Q8TAB5 229 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 RNF139Q8WU17 664 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 DNASE2BQ8WZ79 361 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 SIPA1Q96FS4 1042 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 PRICKLE1Q96MT3 831 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 IPO9Q96P70 1041 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 SLC2A11Q9BYW1 496 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 ADAM33Q9BZ11 813 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 DNAI2Q9GZS0 605 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 TMEM245Q9H330 911 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 IL21RQ9HBE5 538 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 CNGB3Q9NQW8 809 aa17.2■□□□□ 0.34
SCAMP4-203ENST00000411971 ABCC13Q9NSE7 274 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms