RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 RSPH1Q8WYR4 309 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 MYOCQ99972 504 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 OSBPL8Q9BZF1 889 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 CYP2A6P11509 494 aaPredicted RBP11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 IKBKEQ14164 716 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 PACSIN1Q9BY11 444 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 ZC3H13Q5T200 1668 aaKnown RBP11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 TRAV19A0A0A6YYK7 116 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 ANXA5P08758 320 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 MYL12AP19105 171 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 SARSP49591 514 aaKnown RBP11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 METTL16Q86W50 562 aaKnown RBP11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 RASAL3Q86YV0 1011 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 FIG4Q92562 907 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 KCNK16Q96T55 309 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 FBXO44Q9H4M3 255 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 CCDC134Q9H6E4 229 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 KLHL3Q9UH77 587 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 PDXKO00764 312 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 GUF1Q8N442 669 aaKnown RBP11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 TMEM199Q8N511 208 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 PPP1R16AQ96I34 528 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 CNPY3Q9BT09 278 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 UBE2OQ9C0C9 1292 aaKnown RBP11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 A0A088AWK7 358 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 BAIAP3O94812 1187 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 IL1R1P14778 569 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNF10P21506 573 aaPredicted RBP11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 RPS12P25398 132 aaKnown RBP11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 GEMIN4P57678 1058 aaKnown RBP11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 COPZ1P61923 177 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 GPAT3Q53EU6 434 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 CASP12Q6UXS9 341 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 KIRREL3Q8IZU9 778 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 TUT1Q9H6E5 874 aaKnown RBP11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 JMJD4Q9H9V9 463 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 UBQLN1Q9UMX0 589 aaKnown RBP11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNF521Q96K83 1311 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 TPD52L2O43399 206 aaKnown RBP11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 ATP8B1O43520 1251 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 ITGA8P53708 1063 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 TBX4P57082 545 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 MYBPC1Q00872 1141 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 TFDP3Q5H9I0 405 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 MRPL17Q9NRX2 175 aaKnown RBP11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 OR56A5P0C7T3 313 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 GALCP54803 685 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 CHRNB3Q05901 458 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 CUL2Q13617 745 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 TRAPPC11Q7Z392 1133 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 PPIL6Q8IXY8 311 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 SATB2Q9UPW6 733 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 DYTNA2CJ06 578 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 IFNA14P01570 189 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 UBTFL6P0CB48 400 aaPredicted RBP11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 C2CD6Q53TS8 623 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 TRIQKQ629K1 86 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 MAGEC3Q8TD91 643 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 FAM151AQ8WW52 585 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 SH3GL1Q99961 368 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 CDADC1Q9BWV3 514 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 RASA1P20936 1047 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 KCNA3P22001 575 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 KLRC1P26715 233 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 MAGEA4P43358 317 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 GPR15P49685 360 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNF57Q68EA5 555 aaPredicted RBP11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 TDRD5Q8NAT2 981 aaKnown RBP11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 IGDCC4Q8TDY8 1250 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 DCDC2Q9UHG0 476 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 SNCAIPQ9Y6H5 919 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 MCIDASD6RGH6 385 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 MTRF1O75570 445 aaKnown RBP11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 IL6P05231 212 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 GCLCP48506 637 aaPredicted RBP11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 POLR2LP62875 67 aaKnown RBP11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 FMR1Q06787 632 aaKnown RBP eCLIP11.49□□□□□ -0.577e-7■■■■■ 31.8
PRPF40A-202ENST00000410080 DAB2IPQ5VWQ8 1189 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 OVOS1Q6IE37 1185 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 USP45Q70EL2 814 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 TRPM8Q7Z2W7 1104 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNF34Q8IZ26 560 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 FBXO28Q9NVF7 368 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 UXTQ9UBK9 157 aaPredicted RBP11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 DIP2AQ14689 1571 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 PDS5AQ29RF7 1337 aaKnown RBP11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 IGSF6O95976 241 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 ATP5BP06576 529 aaKnown RBP11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 EPORP19235 508 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 CENPCQ03188 943 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 MTAPQ13126 283 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 TSNQ15631 228 aaKnown RBP11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 PROSER1Q86XN7 944 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 ADAM32Q8TC27 787 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 CHP1Q99653 195 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 VANGL2Q9ULK5 521 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 CFAP73A6NFT4 308 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNF839A8K0R7 811 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 TRIP10Q15642 601 aa11.49□□□□□ -0.57
PRPF40A-202ENST00000410080 RAET1GQ6H3X3 334 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms