RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SCOCQ9UIL1 159 aa17.21■□□□□ 0.35
LIMS2-208ENST00000410011 SOX13Q9UN79 622 aa17.21■□□□□ 0.35
LIMS2-208ENST00000410011 AP4E1Q9UPM8 1137 aa17.21■□□□□ 0.35
LIMS2-208ENST00000410011 USP3Q9Y6I4 520 aa17.21■□□□□ 0.35
LIMS2-208ENST00000410011 EVPLQ92817 2033 aa17.21■□□□□ 0.34
LIMS2-208ENST00000410011 MAGEA13PA6NCF6 341 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 TSPAN1O60635 241 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 SP100P23497 879 aaPredicted RBP17.2■□□□□ 0.34
LIMS2-208ENST00000410011 GRK2P25098 689 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 CPOXP36551 454 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 LAMC2Q13753 1193 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 RCN2Q14257 317 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 KCTD2Q14681 263 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 TEDDM1Q5T9Z0 273 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 OR52E8Q6IFG1 317 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 RIPOR1Q6ZS17 1223 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 STRADAQ7RTN6 431 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 LRRC52Q8N7C0 313 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 FBXO27Q8NI29 283 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 TFB1MQ8WVM0 346 aaKnown RBP17.2■□□□□ 0.34
LIMS2-208ENST00000410011 KIF12Q96FN5 646 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 RILPQ96NA2 401 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 PANX3Q96QZ0 392 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 MRPL45Q9BRJ2 306 aaKnown RBP17.2■□□□□ 0.34
LIMS2-208ENST00000410011 R3HDMLQ9H3Y0 253 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 PRR5-ARHGAP8B1AHC4 643 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 CXCL11O14625 94 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 PLIN3O60664 434 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 FGF3P11487 239 aaPredicted RBP17.2■□□□□ 0.34
LIMS2-208ENST00000410011 ANPEPP15144 967 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 ALOX15P16050 662 aaPredicted RBP17.2■□□□□ 0.34
LIMS2-208ENST00000410011 CPA2P48052 419 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 ARHGAP8P85298 464 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 RABGAP1LQ5R372 815 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 NCBP2-AS2Q69YL0 99 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 GADL1Q6ZQY3 521 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 ACOT1Q86TX2 421 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 DTX3LQ8TDB6 740 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 IFT43Q96FT9 208 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 MMP19Q99542 508 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 DHX35Q9H5Z1 703 aaKnown RBP17.2■□□□□ 0.34
LIMS2-208ENST00000410011 EMCNQ9ULC0 261 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 CSADQ9Y600 493 aa17.2■□□□□ 0.34
LIMS2-208ENST00000410011 KIF3CO14782 793 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 AHCYL1O43865 530 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 OPHN1O60890 802 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 ZNF189O75820 626 aaPredicted RBP17.19■□□□□ 0.34
LIMS2-208ENST00000410011 MAP3K6O95382 1288 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 ALDOAP04075 364 aaKnown RBP17.19■□□□□ 0.34
LIMS2-208ENST00000410011 KDSRQ06136 332 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 ZBTB6Q15916 424 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 DCAF4L1Q3SXM0 396 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 PACS1Q6VY07 963 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 ANKRD52Q8NB46 1076 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 KCTD15Q96SI1 283 aaPredicted RBP17.19■□□□□ 0.34
LIMS2-208ENST00000410011 THTPAQ9BU02 230 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 AKT3Q9Y243 479 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 PLXNA1Q9UIW2 1896 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 SF3B1O75533 1304 aaKnown RBP eCLIP17.19■□□□□ 0.34
LIMS2-208ENST00000410011 CCDC195A0A1B0GUA6 201 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 ASB14A6NK59 587 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 SERPINE1P05121 402 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 LGALS2P05162 132 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 KITP10721 976 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 PGAM1P18669 254 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 CRABP2P29373 138 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 GRIA1P42261 906 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 ACADSBP45954 432 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 ALDH18A1P54886 795 aaKnown RBP17.19■□□□□ 0.34
LIMS2-208ENST00000410011 MXRA7P84157 204 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 ARHGAP1Q07960 439 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 ZNF483Q8TF39 744 aaPredicted RBP17.19■□□□□ 0.34
LIMS2-208ENST00000410011 CCDC28BQ9BUN5 200 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 MROH8Q9H579 483 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 DNAJC28Q9NX36 388 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 RBPJLQ9UBG7 517 aa17.19■□□□□ 0.34
LIMS2-208ENST00000410011 APOBEC2Q9Y235 224 aaKnown RBP17.19■□□□□ 0.34
LIMS2-208ENST00000410011 PAPPA2Q9BXP8 1791 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 CHRM1P11229 460 aaPredicted RBP17.18■□□□□ 0.34
LIMS2-208ENST00000410011 SLC1A6P48664 564 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 GLUD2P49448 558 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 BST2Q10589 180 aaKnown RBP17.18■□□□□ 0.34
LIMS2-208ENST00000410011 PRKG1Q13976 671 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 PDE1CQ14123 709 aaPredicted RBP17.18■□□□□ 0.34
LIMS2-208ENST00000410011 CRYBG2Q8N1P7 616 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 PPP1R14CQ8TAE6 165 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 ARNTL2Q8WYA1 636 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 HSFY1Q96LI6 401 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 EBF4Q9BQW3 602 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 TRIM56Q9BRZ2 755 aaKnown RBP17.18■□□□□ 0.34
LIMS2-208ENST00000410011 B3GNT5Q9BYG0 378 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 DLGAP2Q9P1A6 1054 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 MARCOQ9UEW3 520 aaPredicted RBP17.18■□□□□ 0.34
LIMS2-208ENST00000410011 NME7Q9Y5B8 376 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 SNX9Q9Y5X1 595 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 A0A088AWK7 358 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 WDR27A2RRH5 827 aa17.18■□□□□ 0.34
LIMS2-208ENST00000410011 TFE3P19532 575 aaPredicted RBP17.18■□□□□ 0.34
LIMS2-208ENST00000410011 TUBP50607 506 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms