RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 FUT11Q495W5 492 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 MPP7Q5T2T1 576 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 PMF1Q6P1K2 205 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 TMPRSS6Q8IU80 811 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 HDDC3Q8N4P3 179 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 DEFB119Q8N690 84 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 ZNF557Q8N988 423 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-210ENST00000409954 TRIML1Q8N9V2 468 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 CADM4Q8NFZ8 388 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 LMO3Q8TAP4 145 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 NELFBQ8WX92 580 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 TFAP2BQ92481 460 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 EDEM1Q92611 657 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 P2RY11Q96G91 374 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 SFMBT1Q9UHJ3 866 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 RAD54BQ9Y620 910 aa15.15■□□□□ 0.02
MCF2L-210ENST00000409954 ARHGAP33O14559 1287 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 IL12RB1P42701 662 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 SLC11A2P49281 568 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 MARSP56192 900 aaKnown RBP15.14■□□□□ 0.01
MCF2L-210ENST00000409954 RING1Q06587 406 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 HNRNPDQ14103 355 aaKnown RBP15.14■□□□□ 0.01
MCF2L-210ENST00000409954 MORC3Q14149 939 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 ZNF234Q14588 700 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 KLHL10Q6JEL2 608 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 MSANTD2Q6P1R3 559 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 KIAA1324Q6UXG2 1013 aaKnown RBP15.14■□□□□ 0.01
MCF2L-210ENST00000409954 RGL4Q8IZJ4 473 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 WFIKKN2Q8TEU8 576 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 PRCCQ92733 491 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-210ENST00000409954 SIPA1Q96FS4 1042 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 DDX50Q9BQ39 737 aaKnown RBP15.14■□□□□ 0.01
MCF2L-210ENST00000409954 NUP58Q9BVL2 599 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 CIPCQ9C0C6 399 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 CAPN10Q9HC96 672 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 WSB2Q9NYS7 404 aaPredicted RBP15.14■□□□□ 0.01
MCF2L-210ENST00000409954 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.14■□□□□ 0.01
MCF2L-210ENST00000409954 MYH10P35580 1976 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 THADAQ6YHU6 1953 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 ACACBO00763 2458 aa15.14■□□□□ 0.01
MCF2L-210ENST00000409954 IRAK2O43187 625 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 SART1O43290 800 aaKnown RBP15.13■□□□□ 0.01
MCF2L-210ENST00000409954 TSPAN3O60637 253 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 OPHN1O60890 802 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 ACADMP11310 421 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 BMP6P22004 513 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 RDXP35241 583 aaKnown RBP15.13■□□□□ 0.01
MCF2L-210ENST00000409954 ACADSBP45954 432 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 MAPK8P45983 427 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 SEMA3BQ13214 749 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 SLC14A1Q13336 389 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 ST3GAL2Q16842 350 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 NUGGCQ68CJ6 796 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 SMYD5Q6GMV2 418 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 SLC41A1Q8IVJ1 513 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 TRIM59Q8IWR1 403 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 RBBP8NLQ8NC74 664 aaPredicted RBP15.13■□□□□ 0.01
MCF2L-210ENST00000409954 DNASE2BQ8WZ79 361 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 TOE1Q96GM8 510 aaKnown RBP15.13■□□□□ 0.01
MCF2L-210ENST00000409954 FAM81BQ96LP2 452 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 HSPA12BQ96MM6 686 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 SRRTQ9BXP5 876 aaKnown RBP15.13■□□□□ 0.01
MCF2L-210ENST00000409954 MKRN2Q9H000 416 aaKnown RBP15.13■□□□□ 0.01
MCF2L-210ENST00000409954 USP36Q9P275 1121 aaKnown RBP15.13■□□□□ 0.01
MCF2L-210ENST00000409954 CLEC4EQ9ULY5 219 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 CNTN6Q9UQ52 1028 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.13■□□□□ 0.01
MCF2L-210ENST00000409954 MYO16Q9Y6X6 1858 aa15.13■□□□□ 0.01
MCF2L-210ENST00000409954 GON4LQ3T8J9 2241 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 GIPC1O14908 333 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 GABBR2O75899 941 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 AFPP02771 609 aaKnown RBP15.12■□□□□ 0.01
MCF2L-210ENST00000409954 LTFP02788 710 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 ATP5BP06576 529 aaKnown RBP15.12■□□□□ 0.01
MCF2L-210ENST00000409954 EPHX1P07099 455 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 NCAM1P13591 858 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 HOXD9P28356 352 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-210ENST00000409954 RGS7P49802 495 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 MEA1Q16626 185 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 TMEM215Q68D42 235 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 SERPINA13PQ6UXR4 307 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 BEND5Q7L4P6 421 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 RRAGAQ7L523 313 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 KIAA0907Q7Z7F0 614 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-210ENST00000409954 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.12■□□□□ 0.01
MCF2L-210ENST00000409954 STK32AQ8WU08 396 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 TRIM62Q9BVG3 475 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 GTPBP2Q9BX10 602 aaKnown RBP15.12■□□□□ 0.01
MCF2L-210ENST00000409954 ZDHHC5Q9C0B5 715 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 PCED1AQ9H1Q7 454 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 SLC6A17Q9H1V8 727 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 FBRSQ9HAH7 460 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 SUN2Q9UH99 717 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 KIAA1549LQ6ZVL6 1849 aa15.12■□□□□ 0.01
MCF2L-210ENST00000409954 METTL12A8MUP2 240 aa15.11■□□□□ 0.01
MCF2L-210ENST00000409954 M0QYV0 167 aa15.11■□□□□ 0.01
MCF2L-210ENST00000409954 MED7O43513 233 aa15.11■□□□□ 0.01
MCF2L-210ENST00000409954 ACSL4O60488 711 aa15.11■□□□□ 0.01
MCF2L-210ENST00000409954 IGLV3-19P01714 112 aa15.11■□□□□ 0.01
MCF2L-210ENST00000409954 IGLV3-27P01718 113 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms