RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 DCLK3Q9C098 648 aa17.53■□□□□ 0.4
GCFC2-202ENST00000409857 FBXW11Q9UKB1 542 aa17.53■□□□□ 0.4
GCFC2-202ENST00000409857 MTMR11A4FU01 709 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 VDRP11473 427 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 NRIP1P48552 1158 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 ARPP19P56211 112 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 BPIFB4P59827 614 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 NAA25Q14CX7 972 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 ZNF394Q53GI3 561 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 TCEAL5Q5H9L2 206 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 MDH1BQ5I0G3 518 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 ARHGAP17Q68EM7 881 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 FAM47EQ6ZV65 393 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 PCED1BQ96HM7 432 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 HEXIM2Q96MH2 286 aaKnown RBP17.52■□□□□ 0.4
GCFC2-202ENST00000409857 TMLHEQ9NVH6 421 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 PCDHB5Q9Y5E4 795 aa17.52■□□□□ 0.4
GCFC2-202ENST00000409857 PRRC2BQ5JSZ5 2229 aaKnown RBP17.52■□□□□ 0.39
GCFC2-202ENST00000409857 VNN2O95498 520 aa17.52■□□□□ 0.39
GCFC2-202ENST00000409857 RRM1P23921 792 aa17.52■□□□□ 0.39
GCFC2-202ENST00000409857 CDC25CP30307 473 aa17.52■□□□□ 0.39
GCFC2-202ENST00000409857 FOXN2P32314 431 aa17.52■□□□□ 0.39
GCFC2-202ENST00000409857 TMEM184AQ6ZMB5 413 aa17.52■□□□□ 0.39
GCFC2-202ENST00000409857 EP400NLQ6ZTU2 488 aa17.52■□□□□ 0.39
GCFC2-202ENST00000409857 TCEAL8Q8IYN2 117 aa17.52■□□□□ 0.39
GCFC2-202ENST00000409857 EFHBQ8N7U6 833 aa17.52■□□□□ 0.39
GCFC2-202ENST00000409857 MYLPFQ96A32 169 aa17.52■□□□□ 0.39
GCFC2-202ENST00000409857 HNRNPABQ99729 332 aaKnown RBP17.52■□□□□ 0.39
GCFC2-202ENST00000409857 C15orf41Q9Y2V0 281 aa17.52■□□□□ 0.39
GCFC2-202ENST00000409857 PATJQ8NI35 1801 aa17.52■□□□□ 0.39
GCFC2-202ENST00000409857 ALADP13716 330 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 IGFBP4P22692 258 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 ATP5DP30049 168 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 MAGEA11P43364 429 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 HYAL1Q12794 435 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 ORC1Q13415 861 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 COL19A1Q14993 1142 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 STILQ15468 1287 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 CLEC16AQ2KHT3 1053 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 ELMSAN1Q6PJG2 1045 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 SPATA2LQ8IUW3 424 aaPredicted RBP17.51■□□□□ 0.39
GCFC2-202ENST00000409857 MYLIPQ8WY64 445 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 PAIP2Q9BPZ3 127 aaKnown RBP17.51■□□□□ 0.39
GCFC2-202ENST00000409857 ARHGEF3Q9NR81 526 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 PER2O15055 1255 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 RALAP11233 206 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 SSTR3P32745 418 aaPredicted RBP17.51■□□□□ 0.39
GCFC2-202ENST00000409857 RBM23Q86U06 439 aaKnown RBP17.51■□□□□ 0.39
GCFC2-202ENST00000409857 ERICH1Q86X53 443 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 B3GNT5Q9BYG0 378 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 HCFC2Q9Y5Z7 792 aa17.51■□□□□ 0.39
GCFC2-202ENST00000409857 DIAPH2O60879 1101 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 PAX7P23759 505 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 CCDC149Q6ZUS6 474 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 ASRGL1Q7L266 308 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 ANKS1BQ7Z6G8 1248 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 C12orf29Q8N999 325 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 PAPLNO95428 1278 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 SRGAP2BP0DMP2 458 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 TAC1P20366 129 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 GJC1P36383 396 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 MSH2P43246 934 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 KREMEN2Q8NCW0 462 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 CASP10Q92851 521 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 RSRC1Q96IZ7 334 aaKnown RBP17.5■□□□□ 0.39
GCFC2-202ENST00000409857 PGLYRP2Q96PD5 576 aa17.5■□□□□ 0.39
GCFC2-202ENST00000409857 MED7O43513 233 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 SPAG7O75391 227 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 GAS8O95995 478 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 HAPLN1P10915 354 aaPredicted RBP17.49■□□□□ 0.39
GCFC2-202ENST00000409857 FOSL2P15408 326 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 GNA15P30679 374 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 TUFMP49411 452 aaKnown RBP17.49■□□□□ 0.39
GCFC2-202ENST00000409857 TMED2Q15363 201 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 HP1BP3Q5SSJ5 553 aaPredicted RBP17.49■□□□□ 0.39
GCFC2-202ENST00000409857 PAQR9Q6ZVX9 377 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 MCOLN2Q8IZK6 566 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 ATL2Q8NHH9 583 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 SPOCK2Q92563 424 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 SMARCD1Q96GM5 515 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 CEP295NLQ96MC4 621 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 ZNF570Q96NI8 536 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 LPIN3Q9BQK8 851 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 DZANK1Q9NVP4 752 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 SKAP2O75563 359 aaPredicted RBP17.49■□□□□ 0.39
GCFC2-202ENST00000409857 CD19P15391 556 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 WDR4P57081 412 aaKnown RBP17.49■□□□□ 0.39
GCFC2-202ENST00000409857 CCDC142Q17RM4 750 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 PPP1R26Q5T8A7 1209 aaPredicted RBP17.49■□□□□ 0.39
GCFC2-202ENST00000409857 LCLAT1Q6UWP7 414 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 FAM35AQ86V20 835 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 GBP7Q8N8V2 638 aaPredicted RBP17.49■□□□□ 0.39
GCFC2-202ENST00000409857 ATAD1Q8NBU5 361 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 SLC2A14Q8TDB8 520 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 MAGEB18Q96M61 343 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 FAM49BQ9NUQ9 324 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 ABI2Q9NYB9 513 aaPredicted RBP17.49■□□□□ 0.39
GCFC2-202ENST00000409857 NKIRAS1Q9NYS0 192 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 NEU2Q9Y3R4 380 aa17.49■□□□□ 0.39
GCFC2-202ENST00000409857 GREB1Q4ZG55 1949 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms