RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 M0QYT0 321 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 ACSL4O60488 711 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 RNF40O75150 1001 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 TULP3O75386 442 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 KAT7O95251 611 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 MOCS2O96007 188 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-205ENST00000409810 F9P00740 461 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 GYPCP04921 128 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 DESP17661 470 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 ABCB4P21439 1286 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 GRIA2P42262 883 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 SULT1E1P49888 294 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 KDSRQ06136 332 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 C1QBPQ07021 282 aaKnown RBP11.33□□□□□ -0.6
CHMP3-205ENST00000409810 MTAPQ13126 283 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 NME3Q13232 169 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 E2F5Q15329 346 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 ANGPT1Q15389 498 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 ACAD10Q6JQN1 1059 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 SARM1Q6SZW1 724 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 MAMSTRQ6ZN01 415 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 C12orf40Q86WS4 652 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 NAT16Q8N8M0 369 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 TERB1Q8NA31 727 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 PRSS33Q8NF86 280 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 SLC30A5Q8TAD4 765 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 DDI1Q8WTU0 396 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 CPLX3Q8WVH0 158 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 BTN2A3PQ96KV6 586 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 FCRL2Q96LA5 508 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-205ENST00000409810 PCDHB18PQ96TA0 734 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 COX16Q9P0S2 106 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 FBXO4Q9UKT5 387 aa11.33□□□□□ -0.6
CHMP3-205ENST00000409810 FAM170AA1A519 330 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 ANKRD62A6NC57 917 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 TBC1D3BA6NDS4 549 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 PENKP01210 267 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 SERPING1P05155 500 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 GZMAP12544 262 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 SDC4P31431 198 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 TNFRSF4P43489 277 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 SLC6A11P48066 632 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 DGKGP49619 791 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 MRPS21P82921 87 aaKnown RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 TCF15Q12870 199 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 TSR1Q2NL82 804 aaKnown RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 SLC25A52Q3SY17 297 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 HSF5Q4G112 596 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 C2CD6Q53TS8 623 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 ZC3H12AQ5D1E8 599 aaKnown RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 BRMS1LQ5PSV4 323 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 MPP7Q5T2T1 576 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 ACBD5Q5T8D3 534 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 FYB2Q5VWT5 728 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 NAIF1Q69YI7 327 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 DNAJC24Q6P3W2 148 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 Q6ZS52 159 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 MON1BQ7L1V2 547 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 TRMT11Q7Z4G4 463 aaKnown RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 VSTM4Q8IW00 320 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 CCDC117Q8IWD4 279 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 HJURPQ8NCD3 748 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 C3orf20Q8ND61 904 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 BHMTQ93088 406 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 TMA16Q96EY4 203 aaKnown RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 TRIM11Q96F44 468 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 PGAP3Q96FM1 320 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 VCPIP1Q96JH7 1222 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 NPY6RQ99463 290 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 SYT11Q9BT88 431 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 SLC2A11Q9BYW1 496 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 TRIM5Q9C035 493 aa11.32□□□□□ -0.6
CHMP3-205ENST00000409810 FBRSL1Q9HCM7 1045 aaKnown RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 PRMT8Q9NR22 394 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-205ENST00000409810 A0A0A0MRY4 1105 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 KCNU1A8MYU2 1149 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 CHURC1-FNTBB4DL54 471 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 F5H5T6 163 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 PAPSS2O95340 614 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-205ENST00000409810 KRT3P12035 628 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 CASP14P31944 242 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 RDXP35241 583 aaKnown RBP11.31□□□□□ -0.6
CHMP3-205ENST00000409810 FLT3P36888 993 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 CXCL12P48061 93 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 PITX1P78337 314 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-205ENST00000409810 DEUP1Q05D60 604 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 PTP4A2Q12974 167 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 EIF4EBP2Q13542 120 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-205ENST00000409810 ZNF528Q3MIS6 628 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 C10orf76Q5T2E6 689 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 TTC39BQ5VTQ0 682 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-205ENST00000409810 E4F1Q66K89 784 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-205ENST00000409810 ZC3H14Q6PJT7 736 aaKnown RBP11.31□□□□□ -0.6
CHMP3-205ENST00000409810 ZNF571Q7Z3V5 609 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-205ENST00000409810 ANKS1BQ7Z6G8 1248 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 CHSY1Q86X52 802 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 MCOLN2Q8IZK6 566 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 RPLP0P6Q8NHW5 317 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 KCNV2Q8TDN2 545 aa11.31□□□□□ -0.6
CHMP3-205ENST00000409810 UCMAQ8WVF2 138 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms