RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 LMAN1LQ9HAT1 526 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 RBM12Q9NTZ6 932 aaKnown RBP23.25■■□□□ 1.31
PTCD3-203ENST00000409783 ADAMTS1Q9UHI8 967 aa23.25■■□□□ 1.31
PTCD3-203ENST00000409783 XPO7Q9UIA9 1087 aaKnown RBP23.25■■□□□ 1.31
PTCD3-203ENST00000409783 GOLGA6L7A0A1B0GV03 622 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 C2CD4BA6NLJ0 364 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 TMCO5BA8MYB1 307 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 KCNU1A8MYU2 1149 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 M0QYT0 321 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 CACNG3O60359 315 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 MFAP3LO75121 409 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 TYRP14679 529 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 RRM1P23921 792 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 SLC6A4P31645 630 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 SLC25A52Q3SY17 297 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 PPP1R15BQ5SWA1 713 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 PPP1R2P3Q6NXS1 205 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 ISCUQ9H1K1 167 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 PIGVQ9NUD9 493 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 ABHD10Q9NUJ1 306 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.24■■□□□ 1.31
PTCD3-203ENST00000409783 STAP1Q9ULZ2 295 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 NENFQ9UMX5 172 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 ATG2BQ96BY7 2078 aa23.24■■□□□ 1.31
PTCD3-203ENST00000409783 A0A087X0T9 212 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 SIGLEC16A6NMB1 481 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 NEDD8-MDP1E9PL57 170 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 NCAM2O15394 837 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 RTN2O75298 545 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 TULP3O75386 442 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 EGFP01133 1207 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 FTLP02792 175 aaPredicted RBP23.23■■□□□ 1.31
PTCD3-203ENST00000409783 FAM228BP0C875 321 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 GBP1P32455 592 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 RFC1P35251 1148 aaPredicted RBP23.23■■□□□ 1.31
PTCD3-203ENST00000409783 SULT1E1P49888 294 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 ADKP55263 362 aaKnown RBP23.23■■□□□ 1.31
PTCD3-203ENST00000409783 GAS6Q14393 721 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 PPP2R5DQ14738 602 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 NAT16Q8N8M0 369 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 CFAP57Q96MR6 1250 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 CHRDQ9H2X0 955 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 FBXO10Q9UK96 956 aa23.23■■□□□ 1.31
PTCD3-203ENST00000409783 SYNJ2BP-COX16A0A087WUM0 186 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 A0A0A0MRY4 1105 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 ENDOD1O94919 500 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 KRT3P12035 628 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 DRD1P21728 446 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 MAGEA9P43362 315 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 SLC11A2P49281 568 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 CXCR3P49682 368 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 GRSF1Q12849 480 aaKnown RBP eCLIP23.22■■□□□ 1.31
PTCD3-203ENST00000409783 NME3Q13232 169 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 CCDC14Q49A88 953 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 DGKKQ5KSL6 1271 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 RNF43Q68DV7 783 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 PLEKHA7Q6IQ23 1121 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 DTWD2Q8NBA8 298 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 RXFP2Q8WXD0 754 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 MYEOVQ96EZ4 313 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 PNKPQ96T60 521 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 PLK2Q9NYY3 685 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 COX16Q9P0S2 106 aa23.22■■□□□ 1.31
PTCD3-203ENST00000409783 CACNA1IQ9P0X4 2223 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 I6L893 689 aaPredicted RBP23.21■■□□□ 1.31
PTCD3-203ENST00000409783 TRIM24O15164 1050 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 TSPAN3O60637 253 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 MOCS2O96007 188 aaPredicted RBP23.21■■□□□ 1.31
PTCD3-203ENST00000409783 APOEP02649 317 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 CISD3P0C7P0 127 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 SLC2A3P11169 496 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 CHRM1P11229 460 aaPredicted RBP23.21■■□□□ 1.31
PTCD3-203ENST00000409783 CCR1P32246 355 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 SGSHP51688 502 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 ATXN1P54253 815 aaKnown RBP23.21■■□□□ 1.31
PTCD3-203ENST00000409783 LRRC32Q14392 662 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 ASTE1Q2TB18 679 aaPredicted RBP23.21■■□□□ 1.31
PTCD3-203ENST00000409783 RAB6CQ53S08 254 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 PIK3R6Q5UE93 754 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 DNAJC24Q6P3W2 148 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 RFWD3Q6PCD5 774 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 SFTPA1Q8IWL2 248 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 BHMTQ93088 406 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 BTN2A3PQ96KV6 586 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 SELENOOQ9BVL4 669 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 IRX2Q9BZI1 471 aaPredicted RBP23.21■■□□□ 1.31
PTCD3-203ENST00000409783 RAB6CQ9H0N0 254 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 ANLNQ9NQW6 1124 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 CLEC4EQ9ULY5 219 aa23.21■■□□□ 1.31
PTCD3-203ENST00000409783 ANTXRLA6NF34 631 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 K7EQS6 105 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 TPM1P09493 284 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 PDGFRAP16234 1089 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 EIF4A3P38919 411 aaKnown RBP23.2■■□□□ 1.3
PTCD3-203ENST00000409783 PTPN9P43378 593 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 NUBP1P53384 320 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 RPL7AP62424 266 aaKnown RBP23.2■■□□□ 1.3
PTCD3-203ENST00000409783 DEUP1Q05D60 604 aa23.2■■□□□ 1.3
PTCD3-203ENST00000409783 MAPK8IP2Q13387 824 aaPredicted RBP23.2■■□□□ 1.3
PTCD3-203ENST00000409783 MAMLD1Q13495 774 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms