RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 BTBD6Q96KE9 485 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 RNF38Q9H0F5 515 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 OBP2AQ9NY56 170 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 SFMBT1Q9UHJ3 866 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 TLR6Q9Y2C9 796 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 HBS1LQ9Y450 684 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 ZDBF2Q9HCK1 2354 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 KRBA1A5PL33 1030 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 BUB1BO60566 1050 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 MOCS3O95396 460 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 MSNP26038 577 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 PCK1P35558 622 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 RING1Q06587 406 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 ZNF252P-AS1Q0IIN9 211 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 NME3Q13232 169 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 MTA1Q13330 715 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 GRM2Q14416 872 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 TRIP4Q15650 581 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 SLC44A4Q53GD3 710 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 BNIPLQ7Z465 357 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 CELF5Q8N6W0 485 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 TRIM58Q8NG06 486 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 ADAM32Q8TC27 787 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 IRF7Q92985 503 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 RNF34Q969K3 372 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 RSPRY1Q96DX4 576 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 CYP2S1Q96SQ9 504 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 BRD9Q9H8M2 597 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 CA14Q9ULX7 337 aa17.17■□□□□ 0.34
TSPAN4-208ENST00000409531 SYNJ2BP-COX16A0A087WUM0 186 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 SLC12A8A0AV02 714 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 TMEM110-MUSTN1A8MSY1 372 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 MDM4O15151 490 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 AVPR2P30518 371 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 GDI1P31150 447 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 CCR1P32246 355 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 CLCN5P51795 746 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 TBX4P57082 545 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 PITX1P78337 314 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 FCHO2Q0JRZ9 810 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 HADHQ16836 314 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 BRMS1LQ5PSV4 323 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 NUGGCQ68CJ6 796 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 UNC45BQ8IWX7 931 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 YAF2Q8IY57 180 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 PLD4Q96BZ4 506 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 SHDQ96IW2 340 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 LRRC3BQ96PB8 259 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 SLC22A12Q96S37 553 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 KIF9Q9HAQ2 790 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 TRPV5Q9NQA5 729 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 ARHGEF3Q9NR81 526 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 TDP1Q9NUW8 608 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.16■□□□□ 0.345e-7■■■■□ 20.4
TSPAN4-208ENST00000409531 COX16Q9P0S2 106 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 ARHGAP26Q9UNA1 814 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 CPQQ9Y646 472 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 PIEZO1Q92508 2521 aa17.16■□□□□ 0.34
TSPAN4-208ENST00000409531 GRID2IPA4D2P6 1211 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 USP27XA6NNY8 438 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 STK25O00506 426 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 MSI1O43347 362 aaKnown RBP17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 SPOPO43791 374 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 PRPSAP2O60256 369 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 KIF5CO60282 957 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 LRCH4O75427 683 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 PRAMEF12O95522 483 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 APOEP02649 317 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 TFE3P19532 575 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 CXCR3P49682 368 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 AIF1P55008 147 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 HDAC4P56524 1084 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 PRKCQQ04759 706 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 EIF4EBP2Q13542 120 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 PPP2R5DQ14738 602 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 ARL13BQ3SXY8 428 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 OTUD1Q5VV17 481 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 CC2D1AQ6P1N0 951 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 LRRC57Q8N9N7 239 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 FLCNQ8NFG4 579 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 BPIFB1Q8TDL5 484 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 DNASE1L2Q92874 299 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 KLF16Q9BXK1 252 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 DCLK3Q9C098 648 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 WDCPQ9H6R7 721 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 PIGVQ9NUD9 493 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 SLC12A6Q9UHW9 1150 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 ALG6Q9Y672 507 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 CAPN6Q9Y6Q1 641 aa17.15■□□□□ 0.34
TSPAN4-208ENST00000409531 CHADO15335 359 aa17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 PALMO75781 387 aa17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 IGLV3-27P01718 113 aa17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 TCF3P15923 654 aa17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 SSR1P43307 286 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 HARS2P49590 506 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 STARD6P59095 220 aa17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 ACBD5Q5T8D3 534 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 IER5LQ5T953 404 aa17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 SH3PXD2AQ5TCZ1 1133 aa17.14■□□□□ 0.33
TSPAN4-208ENST00000409531 ASTLQ6HA08 431 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms