RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 SCML2Q9UQR0 700 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 NCKAP1Q9Y2A7 1128 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 SLC27A6Q9Y2P4 619 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 RAXQ9Y2V3 346 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 MORC2Q9Y6X9 1032 aaPredicted RBP8.14□□□□□ -1.11
LSM5-202ENST00000409292 PTPRDP23468 1912 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 CEP192Q8TEP8 1941 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 TNRC6BQ9UPQ9 1833 aaKnown RBP8.13□□□□□ -1.11
LSM5-202ENST00000409292 ANTXRLA6NF34 631 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 CAPN8A6NHC0 703 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 PRRT4C9JH25 899 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 RRP8O43159 456 aaKnown RBP8.13□□□□□ -1.11
LSM5-202ENST00000409292 TNFSF14O43557 240 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 GJB3O75712 270 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 DNTTP04053 509 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 EPHX1P07099 455 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 HLA-EP13747 358 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 ACO1P21399 889 aaKnown RBP8.13□□□□□ -1.11
LSM5-202ENST00000409292 ADORA2BP29275 332 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 ABCG1P45844 678 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 CCT8P50990 548 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 TPMTP51580 245 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 C21orf59P57076 290 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 ZNF445P59923 1031 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 HLA-BQ31612 363 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 SOWAHCQ53LP3 525 aaPredicted RBP8.13□□□□□ -1.11
LSM5-202ENST00000409292 CCDC157Q569K6 752 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 C6orf118Q5T5N4 469 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 UNC13DQ70J99 1090 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 MIB1Q86YT6 1006 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 CCDC117Q8IWD4 279 aaPredicted RBP8.13□□□□□ -1.11
LSM5-202ENST00000409292 C12orf56Q8IXR9 622 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 FUKQ8N0W3 1084 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 CRYBG2Q8N1P7 616 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 TTC39CQ8N584 583 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 MDM1Q8TC05 714 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 DDI1Q8WTU0 396 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 GOLGA1Q92805 767 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 CCDC47Q96A33 483 aaKnown RBP8.13□□□□□ -1.11
LSM5-202ENST00000409292 JAKMIP2Q96AA8 810 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 DHX58Q96C10 678 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 ITPKCQ96DU7 683 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 ERLEC1Q96DZ1 483 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 UBL7Q96S82 380 aaPredicted RBP8.13□□□□□ -1.11
LSM5-202ENST00000409292 NT5C1AQ9BXI3 368 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 TRIM9Q9C026 710 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 LHX5Q9H2C1 402 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 SMYD3Q9H7B4 428 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 ELOVL2Q9NXB9 296 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 FAM13BQ9NYF5 915 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 CLIC5Q9NZA1 410 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 USP36Q9P275 1121 aaKnown RBP8.13□□□□□ -1.11
LSM5-202ENST00000409292 THAP10Q9P2Z0 257 aaPredicted RBP8.13□□□□□ -1.11
LSM5-202ENST00000409292 FTSJ1Q9UET6 329 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 EIF2B4Q9UI10 523 aaKnown RBP8.13□□□□□ -1.11
LSM5-202ENST00000409292 RASAL2Q9UJF2 1139 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 FRMD4BQ9Y2L6 1034 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 CFAP47Q6ZTR5 3102 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 ADAMTS9Q9P2N4 1935 aa8.13□□□□□ -1.11
LSM5-202ENST00000409292 ANKRD11Q6UB99 2663 aaPredicted RBP8.12□□□□□ -1.11
LSM5-202ENST00000409292 ADAMTS20P59510 1910 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 TRABD2BA6NFA1 517 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 CAPN9O14815 690 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 TRIM24O15164 1050 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 RNASEH1O60930 286 aaKnown RBP8.12□□□□□ -1.11
LSM5-202ENST00000409292 CBFA2T3O75081 653 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 CCDC130P13994 396 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 JUPP14923 745 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 PIK3CAP42336 1068 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 GRIA4P48058 902 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 HARS2P49590 506 aaKnown RBP8.12□□□□□ -1.11
LSM5-202ENST00000409292 NDST1P52848 882 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 BCAT1P54687 386 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 MFAP3P55082 362 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 ZBTB16Q05516 673 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 CYP4F3Q08477 520 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 KNOP1Q1ED39 458 aaKnown RBP8.12□□□□□ -1.11
LSM5-202ENST00000409292 FNDC3BQ53EP0 1204 aaKnown RBP8.12□□□□□ -1.11
LSM5-202ENST00000409292 MPPE1Q53F39 396 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 SLC45A4Q5BKX6 768 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 FAM124AQ86V42 546 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 TMPRSS12Q86WS5 348 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 CEP57L1Q8IYX8 460 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 ZNF276Q8N554 614 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 GANCQ8TET4 914 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 WFIKKN2Q8TEU8 576 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 RNF139Q8WU17 664 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 NXPE2Q96DL1 559 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 CYFIP2Q96F07 1278 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 HNRNPABQ99729 332 aaKnown RBP8.12□□□□□ -1.11
LSM5-202ENST00000409292 SMOQ99835 787 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 ARHGAP9Q9BRR9 750 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 BTBD1Q9H0C5 482 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 XYLT2Q9H1B5 865 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 SLC6A17Q9H1V8 727 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 ZFAND3Q9H8U3 227 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 CYP3A43Q9HB55 503 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 CSNK1G1Q9HCP0 422 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 OSGEPQ9NPF4 335 aa8.12□□□□□ -1.11
LSM5-202ENST00000409292 FAM49BQ9NUQ9 324 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms