RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 RNASE9P60153 205 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 PITX1P78337 314 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 FANCCQ00597 558 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 DMWDQ09019 674 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 DMC1Q14565 340 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 NR1I3Q14994 352 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 ALLCQ8N6M5 410 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 ZNF397Q8NF99 534 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 SLC39A13Q96H72 371 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 FAM204AQ9H8W3 233 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 SYNJ2BP-COX16A0A087WUM0 186 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 IRAK2O43187 625 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 DAB1O75553 588 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 KLF8O95600 359 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 MOCS2O96007 188 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 APOEP02649 317 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 CYP1A1P04798 512 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 CCDC172P0C7W6 258 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 C2CD6Q53TS8 623 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 ZC3H12AQ5D1E8 599 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 RFWD3Q6PCD5 774 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 TRIM72Q6ZMU5 477 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 XYLT1Q86Y38 959 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 CAMKK1Q8N5S9 505 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 IL17RCQ8NAC3 791 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 RNF34Q969K3 372 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 DDX50Q9BQ39 737 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 DDIT4Q9NX09 232 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 COX16Q9P0S2 106 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 MMP17Q9ULZ9 603 aa18.65■□□□□ 0.58
PDLIM2-206ENST00000409141 LILRB5O75023 590 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 IGLV3-25P01717 112 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 FERP16591 822 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 NOS2P35228 1153 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 PXNP49023 591 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 NFKBIBQ15653 356 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 HSF5Q4G112 596 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 FAM133BQ5BKY9 247 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 FAM102AQ5T9C2 384 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 LONP2Q86WA8 852 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 ZNF513Q8N8E2 541 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 TXNDC5Q8NBS9 432 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 KCNV2Q8TDN2 545 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 HHIPQ96QV1 700 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 SLC2A11Q9BYW1 496 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 ZDHHC4Q9NPG8 344 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 SEPT11Q9NVA2 429 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 SLC12A6Q9UHW9 1150 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 CLEC4EQ9ULY5 219 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 SLC27A6Q9Y2P4 619 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 STARD13Q9Y3M8 1113 aa18.64■□□□□ 0.57
PDLIM2-206ENST00000409141 PRRT4C9JH25 899 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 GOLGA8SH3BPF8 625 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 GFRA2O00451 464 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 GFRA3O60609 400 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 LMNAP02545 664 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 HOXD9P28356 352 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 HOXD11P31277 338 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 SLC6A4P31645 630 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 SCNN1AP37088 669 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 MATKP42679 507 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 UBASH3AP57075 661 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 PIK3R6Q5UE93 754 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 NADSYN1Q6IA69 706 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 ASCL5Q7RTU5 278 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 SLC30A5Q8TAD4 765 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 BAP1Q92560 729 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 PCDHB18PQ96TA0 734 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 AGPAT1Q99943 283 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 IRX2Q9BZI1 471 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 MYO6Q9UM54 1294 aa18.63■□□□□ 0.57
PDLIM2-206ENST00000409141 PRR23AA6NEV1 266 aa18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 SGK1O00141 431 aa18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 SLC2A3P11169 496 aa18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 ABCB4P21439 1286 aa18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 NME3Q13232 169 aa18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 EIF4EBP2Q13542 120 aaPredicted RBP18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 EOGTQ5NDL2 527 aa18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 MMS22LQ6ZRQ5 1243 aa18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 TRMT11Q7Z4G4 463 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 WDR5BQ86VZ2 330 aa18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 ATP6V0D2Q8N8Y2 350 aa18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 TSTD1Q8NFU3 115 aa18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 BTN2A3PQ96KV6 586 aa18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 RRN3Q9NYV6 651 aa18.62■□□□□ 0.57
PDLIM2-206ENST00000409141 LRRC53A6NM62 1247 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 M0QYT0 321 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 TBL1XO60907 577 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 APBB3O95704 486 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 CHRM1P11229 460 aaPredicted RBP18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 MMP8P22894 467 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 CCR1P32246 355 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 NSFP46459 744 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 SGSHP51688 502 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 DGKEP52429 567 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 CRY1Q16526 586 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 GEN1Q17RS7 908 aa18.61■□□□□ 0.57
PDLIM2-206ENST00000409141 CLEC16AQ2KHT3 1053 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms