RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 ZNF507Q8TCN5 953 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 AGR3Q8TD06 166 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 HEXDCQ8WVB3 486 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 OXNAD1Q96HP4 312 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-203ENST00000409050 ELOVL6Q9H5J4 265 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 TAS2R13Q9NYV9 303 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 UXTQ9UBK9 157 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-203ENST00000409050 STOML2Q9UJZ1 356 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 SNX13Q9Y5W8 968 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 FRMPD4Q14CM0 1322 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 CLOCKO15516 846 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 IL6P05231 212 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 MYBP10242 640 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 PAICSP22234 425 aaKnown RBP6.25□□□□□ -1.41
SCN1A-203ENST00000409050 CREMQ03060 361 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 SREBF2Q12772 1141 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 SQLEQ14534 574 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 MEA1Q16626 185 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 RSBN1Q5VWQ0 802 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-203ENST00000409050 IZUMO2Q6UXV1 221 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 IFNEQ86WN2 208 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 TMEM86AQ8N2M4 240 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 ZNF655Q8N720 491 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-203ENST00000409050 HELQQ8TDG4 1101 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 ZNF512Q96ME7 567 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-203ENST00000409050 WDR12Q9GZL7 423 aaKnown RBP6.25□□□□□ -1.41
SCN1A-203ENST00000409050 JMJD4Q9H9V9 463 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 UBAP1Q9NZ09 502 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 KIAA1210Q9ULL0 1709 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 MADDQ8WXG6 1647 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 S100A9P06702 114 aaKnown RBP6.25□□□□□ -1.41
SCN1A-203ENST00000409050 SUPT20HL2P0C7V6 817 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 HNMTP50135 292 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 AQP5P55064 265 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 ANGPT1Q15389 498 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 MROH9Q5TGP6 573 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 BICRALQ6AI39 1079 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 ERAP2Q6P179 960 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 ZNF410Q86VK4 478 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 WDR36Q8NI36 951 aaKnown RBP6.25□□□□□ -1.41
SCN1A-203ENST00000409050 BTN2A2Q8WVV5 523 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 MRPS31Q92665 395 aaKnown RBP6.25□□□□□ -1.41
SCN1A-203ENST00000409050 C1QTNF7Q9BXJ2 289 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 C3orf18Q9UK00 162 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 DUSP12Q9UNI6 340 aa6.25□□□□□ -1.41
SCN1A-203ENST00000409050 FAM237AA0A1B0GTK4 181 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 EFCAB10A6NFE3 127 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 H3BNX3 289 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 FAM20BO75063 409 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 HTR7P34969 479 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 BAATQ14032 418 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 PARP6Q2NL67 630 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CCDC80Q76M96 950 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ADCK2Q7Z695 626 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 DSG4Q86SJ6 1040 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 UNC93AQ86WB7 457 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 TBC1D16Q8TBP0 767 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 AENQ8WTP8 325 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SERPINB11Q96P15 392 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 TMEM79Q9BSE2 394 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SPRTNQ9H040 489 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 DOLKQ9UPQ8 538 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SQORQ9Y6N5 450 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 TARBP1Q13395 1621 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 PP2D1A8MPX8 630 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 E9PBE3 544 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 MYL12BO14950 172 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ATP9AO75110 1047 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 MLYCDO95822 493 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 GNRH1P01148 92 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SERPINF2P08697 491 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 NCAM1P13591 858 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 TARSP26639 723 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 GPC1P35052 558 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 NEK3P51956 506 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CDC42P60953 191 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CYP24A1Q07973 514 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 DPYSQ14117 519 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 BROXQ5VW32 411 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 POTEHQ6S545 545 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 LRRC74BQ6ZQY2 392 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 DDX53Q86TM3 631 aaKnown RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ZDHHC13Q8IUH4 622 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 C8orf59Q8N0T1 100 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ATG16L2Q8NAA4 619 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ZDHHC15Q96MV8 337 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 AGAP3Q96P47 875 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SCUBE2Q9NQ36 999 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ZBTB12Q9Y330 459 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-203ENST00000409050 A0A087WWV3 80 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 UBE2QL1A1L167 161 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 CCDC162PA2VCL2 907 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 LRRC10BA6NIK2 292 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 RGS5O15539 181 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 SGTAO43765 313 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 MGRN1O60291 552 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 ATG7O95352 703 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 TGDSO95455 350 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 HMGCRP04035 888 aa6.24□□□□□ -1.41
SCN1A-203ENST00000409050 OR56A5P0C7T3 313 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms