RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 RASGEF1CQ8N431 466 aa21.23■□□□□ 0.99
CHKB-201ENST00000406938 ZFRQ96KR1 1074 aaKnown RBP21.23■□□□□ 0.99
CHKB-201ENST00000406938 KCTD15Q96SI1 283 aaPredicted RBP21.23■□□□□ 0.99
CHKB-201ENST00000406938 TUBB2BQ9BVA1 445 aa21.23■□□□□ 0.99
CHKB-201ENST00000406938 CALN1Q9BXU9 219 aa21.23■□□□□ 0.99
CHKB-201ENST00000406938 PCDH18Q9HCL0 1135 aa21.23■□□□□ 0.99
CHKB-201ENST00000406938 MTMR10Q9NXD2 777 aa21.23■□□□□ 0.99
CHKB-201ENST00000406938 SMPD4Q9NXE4 827 aa21.23■□□□□ 0.99
CHKB-201ENST00000406938 TRAV19A0A0A6YYK7 116 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 ZNF197O14709 1029 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 TBX10O75333 385 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 L1CAMP32004 1257 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 CDKN2BP42772 138 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 KCNQ1P51787 676 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 DPYSL3Q14195 570 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 PDK2Q15119 407 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 CCDC181Q5TID7 509 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 GAS2L1Q99501 681 aaPredicted RBP21.22■□□□□ 0.99
CHKB-201ENST00000406938 KLF16Q9BXK1 252 aaPredicted RBP21.22■□□□□ 0.99
CHKB-201ENST00000406938 SLC46A2Q9BY10 475 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 L2HGDHQ9H9P8 463 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 CLEC1BQ9P126 229 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 XPO7Q9UIA9 1087 aaKnown RBP21.22■□□□□ 0.99
CHKB-201ENST00000406938 NOTCH4Q99466 2003 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 PGRMC1O00264 195 aaKnown RBP21.22■□□□□ 0.99
CHKB-201ENST00000406938 PAGE1O75459 146 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 FGGP02679 453 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 CEBPBP17676 345 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 PFKLP17858 780 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 DDX6P26196 483 aaKnown RBP eCLIP21.22■□□□□ 0.99
CHKB-201ENST00000406938 COPS2P61201 443 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 COG7P83436 770 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 WHAMMP3Q1A5X7 153 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 CTC1Q2NKJ3 1217 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 TFDP3Q5H9I0 405 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 NUGGCQ68CJ6 796 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 GPR149Q86SP6 731 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 MAP7D3Q8IWC1 876 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 MICALL1Q8N3F8 863 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 FAM71BQ8TC56 605 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 ACTRT1Q8TDG2 376 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 ING5Q8WYH8 240 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 PLD4Q96BZ4 506 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 SLITRK6Q9H5Y7 841 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 GKN1Q9NS71 199 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 CLDND1Q9NY35 253 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 CDH22Q9UJ99 828 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 MRPS23Q9Y3D9 190 aaKnown RBP21.22■□□□□ 0.99
CHKB-201ENST00000406938 CPQQ9Y646 472 aa21.22■□□□□ 0.99
CHKB-201ENST00000406938 DENND4CQ5VZ89 1909 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 DOCK6Q96HP0 2047 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 hCG_1818297A0A087WSY0 165 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 PDE2AO00408 941 aaPredicted RBP21.21■□□□□ 0.99
CHKB-201ENST00000406938 STC2O76061 302 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 IRF1P10914 325 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 HOXB8P17481 243 aaPredicted RBP21.21■□□□□ 0.99
CHKB-201ENST00000406938 PTPN7P35236 360 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 GGCXP38435 758 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 SLC7A9P82251 487 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 MMRN1Q13201 1228 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 PPP2R5EQ16537 467 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 ITFG1Q8TB96 612 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 HAPLN3Q96S86 360 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 HERPUD2Q9BSE4 406 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 OSBPL8Q9BZF1 889 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 TASP1Q9H6P5 420 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 TTC7AQ9ULT0 858 aaPredicted RBP21.21■□□□□ 0.99
CHKB-201ENST00000406938 SNX10Q9Y5X0 201 aa21.21■□□□□ 0.99
CHKB-201ENST00000406938 CLUHO75153 1309 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 FAM72CH0Y354 149 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 KRT10P13645 584 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 CETN2P41208 172 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 ZXDBP98169 803 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 DLX2Q07687 328 aaPredicted RBP21.2■□□□□ 0.98
CHKB-201ENST00000406938 TAZQ16635 292 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 FAM72AQ5TYM5 149 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 KAZNQ674X7 775 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 FAM72DQ6L9T8 149 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 EP400NLQ6ZTU2 488 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 FAM72BQ86X60 149 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 UNC45BQ8IWX7 931 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 ATP6V0D2Q8N8Y2 350 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 TSC1Q92574 1164 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 BTN2A3PQ96KV6 586 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 ZNF670Q9BS34 389 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 HEMGNQ9BXL5 484 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 RNF14Q9UBS8 474 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 C2orf16Q68DN1 1984 aa21.2■□□□□ 0.98
CHKB-201ENST00000406938 CREB3O43889 395 aa21.19■□□□□ 0.98
CHKB-201ENST00000406938 IL4RP24394 825 aa21.19■□□□□ 0.98
CHKB-201ENST00000406938 AVPR1AP37288 418 aa21.19■□□□□ 0.98
CHKB-201ENST00000406938 HARS2P49590 506 aaKnown RBP21.19■□□□□ 0.98
CHKB-201ENST00000406938 SEMA3BQ13214 749 aa21.19■□□□□ 0.98
CHKB-201ENST00000406938 COL19A1Q14993 1142 aa21.19■□□□□ 0.98
CHKB-201ENST00000406938 LONRF2Q1L5Z9 754 aa21.19■□□□□ 0.98
CHKB-201ENST00000406938 PIK3R6Q5UE93 754 aa21.19■□□□□ 0.98
CHKB-201ENST00000406938 VSIG1Q86XK7 387 aa21.19■□□□□ 0.98
CHKB-201ENST00000406938 SLC13A5Q86YT5 568 aaPredicted RBP21.19■□□□□ 0.98
CHKB-201ENST00000406938 CMTM8Q8IZV2 173 aa21.19■□□□□ 0.98
CHKB-201ENST00000406938 SIK2Q9H0K1 926 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms