RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 ARL14EPQ8N8R7 260 aaPredicted RBP8.7□□□□□ -1.02
GPC3-203ENST00000406757 SHKBP1Q8TBC3 707 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 DQX1Q8TE96 717 aaKnown RBP8.7□□□□□ -1.02
GPC3-203ENST00000406757 RNF139Q8WU17 664 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 FAM172AQ8WUF8 416 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 MYRFLQ96LU7 910 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 C16orf45Q96MC5 204 aaPredicted RBP8.7□□□□□ -1.02
GPC3-203ENST00000406757 WDR24Q96S15 920 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 SLC22A12Q96S37 553 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 RNF38Q9H0F5 515 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 SMG9Q9H0W8 520 aaKnown RBP8.7□□□□□ -1.02
GPC3-203ENST00000406757 ZWILCHQ9H900 591 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 TBC1D17Q9HA65 648 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 ASAH2Q9NR71 780 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 KCND1Q9NSA2 647 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 ABCC13Q9NSE7 274 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 ASNSD1Q9NWL6 643 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 EPS15L1Q9UBC2 864 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 IP6K2Q9UHH9 426 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 RASAL2Q9UJF2 1139 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 ASB3Q9Y575 518 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 SNX10Q9Y5X0 201 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 R4GN57 208 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 DMXL1Q9Y485 3027 aa8.7□□□□□ -1.02
GPC3-203ENST00000406757 SLC12A8A0AV02 714 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 ESPNB1AK53 854 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 SCAMP3O14828 347 aaKnown RBP8.69□□□□□ -1.02
GPC3-203ENST00000406757 FANCGO15287 622 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 SART1O43290 800 aaKnown RBP8.69□□□□□ -1.02
GPC3-203ENST00000406757 COCHO43405 550 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 KIF5CO60282 957 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 XYLBO75191 536 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 PROSCO94903 275 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 TRUB2O95900 331 aaKnown RBP8.69□□□□□ -1.02
GPC3-203ENST00000406757 GLI1P08151 1106 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 HNRNPA1P09651 372 aaKnown RBP eCLIP8.69□□□□□ -1.022e-9■■■□□ 15.1
GPC3-203ENST00000406757 IRF1P10914 325 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 RALAP11233 206 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 SRFP11831 508 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 LAMP2P13473 410 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 CEBPBP17676 345 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 SCNN1AP37088 669 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 MARCKSL1P49006 195 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 ZNF143P52747 638 aaPredicted RBP8.69□□□□□ -1.02
GPC3-203ENST00000406757 DEUP1Q05D60 604 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 LLGL1Q15334 1064 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 PABPC1LQ4VXU2 614 aaKnown RBP8.69□□□□□ -1.02
GPC3-203ENST00000406757 HECTD3Q5T447 861 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 SYT10Q6XYQ8 523 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 PDZD4Q76G19 769 aaPredicted RBP8.69□□□□□ -1.02
GPC3-203ENST00000406757 ARHGAP18Q8N392 663 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 RNF10Q8N5U6 811 aaKnown RBP8.69□□□□□ -1.02
GPC3-203ENST00000406757 MAB21L3Q8N8X9 362 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 LRRC57Q8N9N7 239 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 ITFG1Q8TB96 612 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 HDAC7Q8WUI4 952 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 ZNF592Q92610 1267 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 WBP2Q969T9 261 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 TRMT2BQ96GJ1 504 aaKnown RBP8.69□□□□□ -1.02
GPC3-203ENST00000406757 ZSWIM3Q96MP5 696 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 PEBP4Q96S96 227 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 NPY6RQ99463 290 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 CNPY3Q9BT09 278 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 SLC46A2Q9BY10 475 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 FAM204AQ9H8W3 233 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 GKN1Q9NS71 199 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 KLHL11Q9NVR0 708 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.69□□□□□ -1.02
GPC3-203ENST00000406757 GPATCH2LQ9NWQ4 482 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 SMPD4Q9NXE4 827 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 ZDHHC7Q9NXF8 308 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 DNAI1Q9UI46 699 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 NUMBLQ9Y6R0 609 aa8.69□□□□□ -1.02
GPC3-203ENST00000406757 GOLGA6L9A6NEM1 432 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 DPYSL4O14531 572 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 SPOPO43791 374 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 TLR5O60602 858 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 C1RP00736 705 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 LMNAP02545 664 aaKnown RBP8.68□□□□□ -1.02
GPC3-203ENST00000406757 ATP1A1P05023 1023 aaKnown RBP8.68□□□□□ -1.02
GPC3-203ENST00000406757 MBL2P11226 248 aaPredicted RBP8.68□□□□□ -1.02
GPC3-203ENST00000406757 IL1R2P27930 398 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 MIPP30301 263 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 HOXA9P31269 272 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 HADHBP55084 474 aaKnown RBP8.68□□□□□ -1.02
GPC3-203ENST00000406757 HDAC4P56524 1084 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 HTR4Q13639 388 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 PIGHQ14442 188 aaPredicted RBP8.68□□□□□ -1.02
GPC3-203ENST00000406757 IFI16Q16666 785 aaKnown RBP8.68□□□□□ -1.02
GPC3-203ENST00000406757 SMTNL2Q2TAL5 461 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 SLC25A52Q3SY17 297 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 ZC3H12AQ5D1E8 599 aaKnown RBP8.68□□□□□ -1.02
GPC3-203ENST00000406757 KCNT1Q5JUK3 1230 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 PRSS36Q5K4E3 855 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 GPR158Q5T848 1215 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 NYAP1Q6ZVC0 841 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 ERMP1Q7Z2K6 904 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 PEX26Q7Z412 305 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 SLFN11Q7Z7L1 901 aa8.68□□□□□ -1.02
GPC3-203ENST00000406757 NT5DC3Q86UY8 548 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms