RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 FBF1Q8TES7 1133 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 MRRFQ96E11 262 aaKnown RBP25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 CHMP6Q96FZ7 201 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 PRMT1Q99873 361 aaKnown RBP25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 COLEC11Q9BWP8 271 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 WDCPQ9H6R7 721 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 PSMC3IPQ9P2W1 217 aaPredicted RBP25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 FETUBQ9UGM5 382 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 TMEM189-UBE2V1I3L0A0 370 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 COL6A1P12109 1028 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 CBLBQ13191 982 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 BFSP2Q13515 415 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 RASA2Q15283 850 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 PDZD4Q76G19 769 aaPredicted RBP25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 MGARPQ8TDB4 240 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 ZNF296Q8WUU4 475 aaPredicted RBP25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 DYDC1Q8WWB3 177 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 ACSS3Q9H6R3 686 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 TMEM161AQ9NX61 479 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 TEX264Q9Y6I9 313 aa25.49■■□□□ 1.67
DNMT3A-206ENST00000406659 METTL18O95568 372 aa25.48■■□□□ 1.67
DNMT3A-206ENST00000406659 GRIK1P39086 918 aa25.48■■□□□ 1.67
DNMT3A-206ENST00000406659 CXCR3P49682 368 aa25.48■■□□□ 1.67
DNMT3A-206ENST00000406659 TPI1P60174 286 aa25.48■■□□□ 1.67
DNMT3A-206ENST00000406659 CPLX4Q7Z7G2 160 aa25.48■■□□□ 1.67
DNMT3A-206ENST00000406659 IGDCC3Q8IVU1 814 aa25.48■■□□□ 1.67
DNMT3A-206ENST00000406659 ANKRD42Q8N9B4 389 aa25.48■■□□□ 1.67
DNMT3A-206ENST00000406659 MCUQ8NE86 351 aa25.48■■□□□ 1.67
DNMT3A-206ENST00000406659 LGMNQ99538 433 aa25.48■■□□□ 1.67
DNMT3A-206ENST00000406659 SEZ6LQ9BYH1 1024 aa25.48■■□□□ 1.67
DNMT3A-206ENST00000406659 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.48■■□□□ 1.672e-6■■■■■ 47.3
DNMT3A-206ENST00000406659 PRG3Q9Y2Y8 225 aaPredicted RBP25.48■■□□□ 1.67
DNMT3A-206ENST00000406659 FAM72CH0Y354 149 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 KRT15P19012 456 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 HCAR3P49019 387 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 AP1B1Q10567 949 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 SLC39A12Q504Y0 691 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 FAM72AQ5TYM5 149 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 FAM72DQ6L9T8 149 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 TRABD2AQ86V40 505 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 FAM72BQ86X60 149 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 DCP1BQ8IZD4 617 aaKnown RBP25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 SCAMP5Q8TAC9 235 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 RNF34Q969K3 372 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 CCDC134Q9H6E4 229 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 ANLNQ9NQW6 1124 aa25.47■■□□□ 1.67
DNMT3A-206ENST00000406659 A0A0A0MRY4 1105 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 PPP1R12AO14974 1030 aaPredicted RBP25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 DCLK1O15075 740 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 AVILO75366 819 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 TADA2AO75478 443 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 VAV1P15498 845 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 IFNAR2P48551 515 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 CDK7P50613 346 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 YWHAGP61981 247 aaKnown RBP eCLIP25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 PRKD1Q15139 912 aaPredicted RBP25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 ANKRD20A2Q5SQ80 823 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 ANKRD20A1Q5TYW2 823 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 ANKRD20A3Q5VUR7 823 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 CCNYQ8ND76 341 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 SPATA13Q96N96 652 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 NKIRAS1Q9NYS0 192 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 DNAJB4Q9UDY4 337 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 SPAG6O75602 509 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 OAZ2O95190 189 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 OR4Q2P0C623 313 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 TPSB2P20231 275 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 DRD4P21917 467 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 FDFT1P37268 417 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 ZNF135P52742 658 aaPredicted RBP25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 SEMA3BQ13214 749 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 TPSAB1Q15661 275 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 PKN2Q16513 984 aaKnown RBP25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 BEND5Q7L4P6 421 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 TAC4Q86UU9 113 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 SPATS2Q86XZ4 545 aaKnown RBP25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 ABI1Q8IZP0 508 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 TKTL2Q9H0I9 626 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 ZCWPW1Q9H0M4 648 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 SENP1Q9P0U3 644 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 PCDHB7Q9Y5E2 793 aa25.46■■□□□ 1.67
DNMT3A-206ENST00000406659 ENPP3O14638 875 aa25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 ERCC2P18074 760 aa25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 MSH2P43246 934 aa25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 GLUD2P49448 558 aa25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 IFRD2Q12894 506 aaPredicted RBP25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 EFTUD2Q15029 972 aaKnown RBP eCLIP25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 LRRC14Q15048 493 aa25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 MICALCLQ6ZW33 695 aa25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 TAX1BP1Q86VP1 789 aa25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 CAND1Q86VP6 1230 aaKnown RBP25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 SCN4BQ8IWT1 228 aa25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 DQX1Q8TE96 717 aaKnown RBP25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 ZNF317Q96PQ6 595 aaPredicted RBP25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 CYTH2Q99418 400 aa25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 EPAS1Q99814 870 aa25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 TRABDQ9H4I3 376 aa25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 ELAC1Q9H777 363 aaKnown RBP25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 RAD54BQ9Y620 910 aa25.45■■□□□ 1.66
DNMT3A-206ENST00000406659 I6L893 689 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms