RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 PPP1R12AO14974 1030 aaPredicted RBP11.07□□□□□ -0.64
CLIP4-204ENST00000404424 FKBP6O75344 327 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 MYL4P12829 197 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 SP100P23497 879 aaPredicted RBP11.07□□□□□ -0.64
CLIP4-204ENST00000404424 MXRA7P84157 204 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 ARHGAP8P85298 464 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 NIPAL4Q0D2K0 466 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 LAMC2Q13753 1193 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 RIPOR1Q6ZS17 1223 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 SPATA13Q96N96 652 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 CSPG4P5Q96PW8 444 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 FERMT1Q9BQL6 677 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 MRPL45Q9BRJ2 306 aaKnown RBP11.07□□□□□ -0.64
CLIP4-204ENST00000404424 THTPAQ9BU02 230 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 ZNF395Q9H8N7 513 aaPredicted RBP11.07□□□□□ -0.64
CLIP4-204ENST00000404424 MTMR10Q9NXD2 777 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 DTLQ9NZJ0 730 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 RCOR3Q9P2K3 495 aaPredicted RBP11.07□□□□□ -0.64
CLIP4-204ENST00000404424 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 ASB14A6NK59 587 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 TSPAN1O60635 241 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 CAPN15O75808 1086 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 DGKIO75912 1065 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 GSRP00390 522 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 GRK2P25098 689 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 DCAF4L1Q3SXM0 396 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 FAM182AQ5T1J6 154 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 TMCO4Q5TGY1 634 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 MBLAC2Q68D91 279 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 NCBP2-AS2Q69YL0 99 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 AAGABQ6PD74 315 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 OLFM3Q96PB7 478 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 PANX3Q96QZ0 392 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 NR1H4Q96RI1 486 aaPredicted RBP11.07□□□□□ -0.64
CLIP4-204ENST00000404424 KCTD15Q96SI1 283 aaPredicted RBP11.07□□□□□ -0.64
CLIP4-204ENST00000404424 YIPF3Q9GZM5 350 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 SLC24A3Q9HC58 644 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 KRT82Q9NSB4 513 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 DDX43Q9NXZ2 648 aaKnown RBP11.07□□□□□ -0.64
CLIP4-204ENST00000404424 DLGAP2Q9P1A6 1054 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 SLC7A8Q9UHI5 535 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 APOBEC2Q9Y235 224 aaKnown RBP11.07□□□□□ -0.64
CLIP4-204ENST00000404424 SNX9Q9Y5X1 595 aa11.07□□□□□ -0.64
CLIP4-204ENST00000404424 KAT6AQ92794 2004 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 WDR27A2RRH5 827 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 EIF4E1BA6NMX2 242 aaKnown RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 PLIN3O60664 434 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 GABBR2O75899 941 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 STK10O94804 968 aaKnown RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 SERPINE1P05121 402 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 LGALS2P05162 132 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 ANPEPP15144 967 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 PGAM1P18669 254 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 ARL4AP40617 200 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 GRIA1P42261 906 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 ACADSBP45954 432 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 SLC1A6P48664 564 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 RPL34P49207 117 aaKnown RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 BST2Q10589 180 aaKnown RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 N4BP2L1Q5TBK1 243 aaPredicted RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 PACS1Q6VY07 963 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 STRADAQ7RTN6 431 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 ADGRG6Q86SQ4 1221 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 PSTKQ8IV42 348 aaKnown RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 LRRC52Q8N7C0 313 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 FBXO27Q8NI29 283 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 PPP4R1Q8TF05 950 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 NLRP7Q8WX94 980 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 GATA6Q92908 595 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 EBF4Q9BQW3 602 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 TRIM56Q9BRZ2 755 aaKnown RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 B3GNT5Q9BYG0 378 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 R3HDMLQ9H3Y0 253 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 SPATS2LQ9NUQ6 558 aaKnown RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 FAM49BQ9NUQ9 324 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 CXCL11O14625 94 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 KIF3CO14782 793 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 AHCYL1O43865 530 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 OPHN1O60890 802 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 ZNF189O75820 626 aaPredicted RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 VTNP04004 478 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 ALDOAP04075 364 aaKnown RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 FESP07332 822 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 FGF3P11487 239 aaPredicted RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 CALRP27797 417 aaKnown RBP11.06□□□□□ -0.64
CLIP4-204ENST00000404424 BCAT1P54687 386 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 TUBB3Q13509 450 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 MDH1BQ5I0G3 518 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 TEDDM1Q5T9Z0 273 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 C1orf146Q5VVC0 180 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 CASC4Q6P4E1 433 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 ZCCHC23Q6ZST2 131 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 DENND5BQ6ZUT9 1274 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 ANKRD52Q8NB46 1076 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 COLGALT1Q8NBJ5 622 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 LRRN4Q8WUT4 740 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 UCMAQ8WVF2 138 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 CNKSR2Q8WXI2 1034 aa11.06□□□□□ -0.64
CLIP4-204ENST00000404424 PPP1R16BQ96T49 567 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms