RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 CCDC106Q9BWC9 280 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 FZD8Q9H461 694 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 DPP3Q9NY33 737 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 CPSF2Q9P2I0 782 aaKnown RBP12.36□□□□□ -0.43
RBM39-206ENST00000403542 PLA2G4CQ9UP65 541 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 MGAMO43451 1857 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 KCNK1O00180 336 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 DCXO43602 365 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 ZNF286BP0CG31 522 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 ARF4P18085 180 aaPredicted RBP12.36□□□□□ -0.43
RBM39-206ENST00000403542 PROZP22891 400 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 PRKCHP24723 683 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 SLC1A6P48664 564 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 PITX1P78337 314 aaPredicted RBP12.36□□□□□ -0.43
RBM39-206ENST00000403542 SARNPP82979 210 aaKnown RBP12.36□□□□□ -0.43
RBM39-206ENST00000403542 ASPHQ12797 758 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 PDE1CQ14123 709 aaPredicted RBP12.36□□□□□ -0.43
RBM39-206ENST00000403542 DLG2Q15700 870 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 RASIP1Q5U651 963 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 NME8Q8N427 588 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 ADAM32Q8TC27 787 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 FGD4Q96M96 766 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 ANKRD27Q96NW4 1050 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 GBP5Q96PP8 586 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 APOL2Q9BQE5 337 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 NT5C1AQ9BXI3 368 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 FRMD8P1Q9BZ68 369 aaPredicted RBP12.36□□□□□ -0.43
RBM39-206ENST00000403542 CAB39LQ9H9S4 337 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 IFT122Q9HBG6 1241 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 PIM2Q9P1W9 311 aa12.36□□□□□ -0.43
RBM39-206ENST00000403542 BARX2Q9UMQ3 279 aaPredicted RBP12.36□□□□□ -0.43
RBM39-206ENST00000403542 A0A088AWK7 358 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 NEMP1O14524 444 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 CREB3O43889 395 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 OPHN1O60890 802 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 RNASEH1O60930 286 aaKnown RBP12.35□□□□□ -0.43
RBM39-206ENST00000403542 TXNP10599 105 aaKnown RBP12.35□□□□□ -0.43
RBM39-206ENST00000403542 CHRM1P11229 460 aaPredicted RBP12.35□□□□□ -0.43
RBM39-206ENST00000403542 AP2B1P63010 937 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 SATB1Q01826 763 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 DSG1Q02413 1049 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 CDC16Q13042 620 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 HIC1Q14526 733 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 WDR75Q8IWA0 830 aaKnown RBP12.35□□□□□ -0.43
RBM39-206ENST00000403542 SPATC1LQ9H0A9 340 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 ZNF212Q9UDV6 495 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 EMCNQ9ULC0 261 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 APOBEC2Q9Y235 224 aaKnown RBP12.35□□□□□ -0.43
RBM39-206ENST00000403542 C19orf81C9J6K1 198 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 SPAG6O75602 509 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 DGKIO75912 1065 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 ENDOD1O94919 500 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 LYNP07948 512 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 INSRRP14616 1297 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 VAV1P15498 845 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 CCR10P46092 362 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 ZNF280AP59817 542 aaPredicted RBP12.35□□□□□ -0.43
RBM39-206ENST00000403542 ACTR3P61158 418 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 CUL3Q13618 768 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 ZRSR2Q15696 482 aaKnown RBP12.35□□□□□ -0.43
RBM39-206ENST00000403542 SOWAHAQ2M3V2 549 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 SPDYAQ5MJ70 313 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 OLFML1Q6UWY5 402 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 RNF111Q6ZNA4 994 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 MOB2Q70IA6 237 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 MAVSQ7Z434 540 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 RASSF3Q86WH2 238 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 DEFB107AQ8IZN7 70 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 KHSRPQ92945 711 aaKnown RBP eCLIP12.35□□□□□ -0.431e-9■■■□□ 15.9
RBM39-206ENST00000403542 C18orf25Q96B23 403 aaPredicted RBP12.35□□□□□ -0.43
RBM39-206ENST00000403542 OTUD5Q96G74 571 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 XPNPEP3Q9NQH7 507 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 TMEM216Q9P0N5 145 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 ANGPTL2Q9UKU9 493 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 AP4E1Q9UPM8 1137 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 NME7Q9Y5B8 376 aa12.35□□□□□ -0.43
RBM39-206ENST00000403542 SIN3BO75182 1162 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 PEX2P28328 305 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 TYK2P29597 1187 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 GRM1Q13255 1194 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 VGLL4Q14135 290 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 BOLA3Q53S33 107 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 PIWIL2Q8TC59 973 aaKnown RBP12.34□□□□□ -0.43
RBM39-206ENST00000403542 ECSITQ9BQ95 431 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 C2orf40Q9H1Z8 148 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 PDZD7Q9H5P4 517 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 GBA2Q9HCG7 927 aaPredicted RBP12.34□□□□□ -0.43
RBM39-206ENST00000403542 THAP1Q9NVV9 213 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 DTLQ9NZJ0 730 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 AK5Q9Y6K8 562 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 SDR42E2A6NKP2 422 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 GSRP00390 522 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 GABRB2P47870 512 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 ZNF618Q5T7W0 954 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 TEDDM1Q5T9Z0 273 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 COLGALT1Q8NBJ5 622 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 CXorf38Q8TB03 319 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 GATA6Q92908 595 aa12.34□□□□□ -0.43
RBM39-206ENST00000403542 KCTD15Q96SI1 283 aaPredicted RBP12.34□□□□□ -0.43
RBM39-206ENST00000403542 TRIM4Q9C037 500 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms