RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TBC1D3Q8IZP1 549 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 PNPLA1Q8N8W4 532 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 FAM71DQ8N9W8 422 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 NAXEQ8NCW5 288 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 ABHD11Q8NFV4 315 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 MAFAQ8NHW3 353 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 RP9Q8TA86 221 aaKnown RBP4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 LINC00476Q8WZB0 136 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 HVCN1Q96D96 273 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 KTI12Q96EK9 354 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 PPM1MQ96MI6 270 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 SEC62Q99442 399 aaKnown RBP4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 ZNF747Q9BV97 191 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 FSD1LQ9BXM9 530 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 GPR63Q9BZJ6 419 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 CLPBQ9H078 707 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 TMEM160Q9NX00 188 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 SH2B3Q9UQQ2 575 aa4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 UBE2J1Q9Y385 318 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P17-201ENST00000403495 FYB1O15117 783 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 NKX2-8O15522 239 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 HOXC11O43248 304 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 TMPRSS11DO60235 418 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 ZNF202O95125 648 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 ESRRBO95718 433 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 NPSP0C0P6 89 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 ACP5P13686 325 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 APEHP13798 732 aaKnown RBP4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 JAK3P52333 1124 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 NR1H2P55055 460 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 KRTAP10-2P60368 255 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 RBM6P78332 1123 aaKnown RBP4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 CHRNDQ07001 517 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 TBX2Q13207 712 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 TRPC3Q13507 836 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 NBPF8Q3BBV2 869 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 TSTD2Q5T7W7 516 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 SLC9C2Q5TAH2 1124 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 RETSATQ6NUM9 610 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 KYAT3Q6YP21 454 aaKnown RBP4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 ANKS1BQ7Z6G8 1248 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 OVCA2Q8WZ82 227 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 LARP4BQ92615 738 aaKnown RBP4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 ARRDC3Q96B67 414 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 EDC3Q96F86 508 aaKnown RBP4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 FAR2Q96K12 515 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 REEP2Q9BRK0 252 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 SLC26A6Q9BXS9 759 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 CIPCQ9C0C6 399 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 CDCP1Q9H5V8 836 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 KCNK9Q9NPC2 374 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 UBN1Q9NPG3 1134 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 WASH6PQ9NQA3 447 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 ABHD10Q9NUJ1 306 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 FOXJ2Q9P0K8 574 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 HSF4Q9ULV5 492 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 NFU1Q9UMS0 254 aa4.37□□□□□ -1.71
HMGB1P17-201ENST00000403495 COL4A3Q01955 1670 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 VWA3AA6NCI4 1184 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 GRM8O00222 908 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 ZNF213O14771 459 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 MBD4O95243 580 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 TFRCP02786 760 aaKnown RBP4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 CNPP09543 421 aaKnown RBP4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 DLDP09622 509 aaKnown RBP4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 FAM163BP0C2L3 166 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 CYP2D6P10635 497 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 DRD4P21917 467 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 AGTR2P50052 363 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 MPP1Q00013 466 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 MAPK7Q13164 816 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 CBFBQ13951 182 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 DCTN1Q14203 1278 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 INTS11Q5TA45 600 aaKnown RBP4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 MAP3K21Q5TCX8 1036 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 HECTD2Q5U5R9 776 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 ATG16L1Q676U5 607 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 FAM180BQ6P0A1 224 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 Q6ZPA2 131 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 C12orf76Q8N812 135 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 FSIP1Q8NA03 581 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 NEU4Q8WWR8 484 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 SDCCAG3Q96C92 435 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 SNX18Q96RF0 628 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 THAP7Q9BT49 309 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 CINPQ9BW66 212 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 IL21RQ9HBE5 538 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 SNX15Q9NRS6 342 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 ASIC5Q9NY37 505 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 BAG5Q9UL15 447 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 ARHGAP26Q9UNA1 814 aa4.36□□□□□ -1.71
HMGB1P17-201ENST00000403495 C16orf96A6NNT2 1141 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 PEX12O00623 359 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 TJP3O95049 919 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 C1RP00736 705 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 INSRRP14616 1297 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 CHN1P15882 459 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 XBP1P17861 261 aa4.35□□□□□ -1.71
HMGB1P17-201ENST00000403495 MAKP20794 623 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms