RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 NEDD1Q8NHV4 660 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 KTI12Q96EK9 354 aaPredicted RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 UIMC1Q96RL1 719 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 TESK2Q96S53 571 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 EIF3CQ99613 913 aaKnown RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 HDHD5Q9BXW7 423 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 RNF32Q9H0A6 362 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 DEF6Q9H4E7 631 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 GSTO2Q9H4Y5 243 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 SH3BP4Q9P0V3 963 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 GPR160Q9UJ42 338 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 SH3BGRL2Q9UJC5 107 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 LTBP1Q14766 1721 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 PARD3Q8TEW0 1356 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 IBTKQ9P2D0 1353 aaPredicted RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 FAM181BA6NEQ2 426 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 FAM171A2A8MVW0 826 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 SH2B2O14492 632 aaPredicted RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 PTPN9P43378 593 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 BMPR2Q13873 1038 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 LBRQ14739 615 aaKnown RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 USH1GQ495M9 461 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 LDLRAP1Q5SW96 308 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 MANEALQ5VSG8 457 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 TMEM198Q66K66 360 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 TAOK1Q7L7X3 1001 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 TMEFF1Q8IYR6 380 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 ZNF619Q8N2I2 560 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 TBC1D15Q8TC07 691 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 GRK7Q8WTQ7 553 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 PRR11Q96HE9 360 aaPredicted RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 MEGF10Q96KG7 1140 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 FER1L6-AS2Q96M78 137 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 CMTM3Q96MX0 182 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 PHF7Q9BWX1 381 aaPredicted RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 SERTAD3Q9UJW9 196 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 GTF3C4Q9UKN8 822 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 DERAQ9Y315 318 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 TTC36A6NLP5 189 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 TBX10O75333 385 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 CSPG5O95196 566 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 PRKCBP05771 671 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 TPM2P07951 284 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 HSP90AB1P08238 724 aaKnown RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 GAP43P17677 238 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 BUD31P41223 144 aaPredicted RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 CAPZA2P47755 286 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 RRP1P56182 461 aaKnown RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 FOXO1Q12778 655 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 RTP5Q14D33 572 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 COL28A1Q2UY09 1125 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 MROH9Q5TGP6 573 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 MOB3CQ70IA8 216 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 SAMD14Q8IZD0 417 aaPredicted RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 NLGN4XQ8N0W4 816 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 PDPRQ8NCN5 879 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 RNFT2Q96EX2 444 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 SNX27Q96L92 541 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 LINC00615Q96LM1 132 aaPredicted RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 WDR24Q96S15 920 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 USP29Q9HBJ7 922 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 TRMT1Q9NXH9 659 aaKnown RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 ALKBH4Q9NXW9 302 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 AATFQ9NY61 560 aaKnown RBP eCLIP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 SARDHQ9UL12 918 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 EXOC7Q9UPT5 735 aa4.03□□□□□ -1.76
CCDC178-204ENST00000403303 R3HDM2Q9Y2K5 976 aaKnown RBP4.03□□□□□ -1.76
CCDC178-204ENST00000403303 DDX60Q8IY21 1712 aaKnown RBP4.02□□□□□ -1.77
CCDC178-204ENST00000403303 ISM1B1AKI9 464 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 E9PLN8 166 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 NRP2O60462 931 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 RPLP2P05387 115 aaKnown RBP4.02□□□□□ -1.77
CCDC178-204ENST00000403303 KCNA2P16389 499 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 MCM7P33993 719 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 SREBF1P36956 1147 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 SATB1Q01826 763 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 ACTN3Q08043 901 aaPredicted RBP4.02□□□□□ -1.77
CCDC178-204ENST00000403303 SETMARQ53H47 684 aaPredicted RBP4.02□□□□□ -1.77
CCDC178-204ENST00000403303 TMEM196Q5HYL7 178 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 FAM111BQ6SJ93 734 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 ZNF574Q6ZN55 896 aaPredicted RBP4.02□□□□□ -1.77
CCDC178-204ENST00000403303 N4BP2L2Q92802 583 aaPredicted RBP4.02□□□□□ -1.77
CCDC178-204ENST00000403303 WNT8BQ93098 351 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 NMD3Q96D46 503 aaKnown RBP4.02□□□□□ -1.77
CCDC178-204ENST00000403303 VKORC1Q9BQB6 163 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 KAT14Q9H8E8 782 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 SLC28A3Q9HAS3 691 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 HCFC1R1Q9NWW0 138 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 NDUFA13Q9P0J0 144 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 PLEKHM1Q9Y4G2 1056 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 CFAP20Q9Y6A4 193 aaKnown RBP4.02□□□□□ -1.77
CCDC178-204ENST00000403303 ARHGEF17Q96PE2 2063 aaPredicted RBP4.02□□□□□ -1.77
CCDC178-204ENST00000403303 MAP3K5Q99683 1374 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 TEX13CA0A0J9YWL9 993 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 LOC102723971A0A1B0GUV8 181 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 H0Y626 953 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 SMPD2O60906 423 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 CBX6O95503 412 aa4.02□□□□□ -1.77
CCDC178-204ENST00000403303 ACP5P13686 325 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms