RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 FBXO38Q6PIJ6 1188 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 Q6ZNB5 142 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 PABPC5Q96DU9 382 aaKnown RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 RPGRIP1Q96KN7 1286 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 CORO1BQ9BR76 489 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 KIF9Q9HAQ2 790 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 PCDH18Q9HCL0 1135 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 CLEC1BQ9P126 229 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 SLC12A6Q9UHW9 1150 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 PACSIN2Q9UNF0 486 aaPredicted RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 AP4E1Q9UPM8 1137 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 RAD54BQ9Y620 910 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 hCG_1818297A0A087WSY0 165 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 DRGXA6NNA5 263 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 ZNF189O75820 626 aaPredicted RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 KRT1P04264 644 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 IL4RP24394 825 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 EFEMP1Q12805 493 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 ADGRE1Q14246 886 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 CYP1B1Q16678 543 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 CDO1Q16878 200 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 TFDP3Q5H9I0 405 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 SLC9A4Q6AI14 798 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 HTR3DQ70Z44 454 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 RSRC2Q7L4I2 434 aaKnown RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 RBM23Q86U06 439 aaKnown RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 C12orf50Q8NA57 414 aaPredicted RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 ADAMTS19Q8TE59 1207 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 COG1Q8WTW3 980 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 SMG7Q92540 1137 aaKnown RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 RAPGEF5Q92565 580 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 KCTD15Q96SI1 283 aaPredicted RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 RNF38Q9H0F5 515 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 PRDM12Q9H4Q4 367 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 ANLNQ9NQW6 1124 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 ZNF446Q9NWS9 450 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 SFMBT1Q9UHJ3 866 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 RASAL2Q9UJF2 1139 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 NEU3Q9UQ49 428 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 ZFP37Q9Y6Q3 630 aaPredicted RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 V9GYY5 206 aaPredicted RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 DOCK4Q8N1I0 1966 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 SLC12A8A0AV02 714 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 C2orf78A6NCI8 922 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 I6L893 689 aaPredicted RBP7.09□□□□□ -1.27
USP16-203ENST00000399975 STC2O76061 302 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 APOEP02649 317 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 ZFXP17010 805 aaPredicted RBP7.09□□□□□ -1.27
USP16-203ENST00000399975 ATXN1P54253 815 aaKnown RBP7.09□□□□□ -1.27
USP16-203ENST00000399975 MLLT6P55198 1093 aaPredicted RBP7.09□□□□□ -1.27
USP16-203ENST00000399975 USP4Q13107 963 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 NME3Q13232 169 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 DPYSQ14117 519 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 SIX1Q15475 284 aaPredicted RBP7.09□□□□□ -1.27
USP16-203ENST00000399975 DAB2IPQ5VWQ8 1189 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 DRICH1Q6PGQ1 229 aaPredicted RBP7.09□□□□□ -1.27
USP16-203ENST00000399975 BBS12Q6ZW61 710 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 SLC13A5Q86YT5 568 aaPredicted RBP7.09□□□□□ -1.27
USP16-203ENST00000399975 CPXM2Q8N436 756 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 CEP112Q8N8E3 955 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 KCTD6Q8NC69 237 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 DDX50Q9BQ39 737 aaKnown RBP7.09□□□□□ -1.27
USP16-203ENST00000399975 SLC46A2Q9BY10 475 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 TKTL2Q9H0I9 626 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 ZWILCHQ9H900 591 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 HOMER3Q9NSC5 361 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 HCFC1R1Q9NWW0 138 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 GDE1Q9NZC3 331 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 PCSK1NQ9UHG2 260 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 MKI67P46013 3256 aaKnown RBP7.09□□□□□ -1.27
USP16-203ENST00000399975 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.09□□□□□ -1.27
USP16-203ENST00000399975 E2F8A0AVK6 867 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 H3BRJ5 948 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 PGRMC1O00264 195 aaKnown RBP7.09□□□□□ -1.27
USP16-203ENST00000399975 MYL4P12829 197 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 TGM2P21980 687 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 MTHFRP42898 656 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 TFDP2Q14188 446 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 CA9Q16790 459 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 SLC5A9Q2M3M2 681 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 ATP13A4Q4VNC1 1196 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 ANKRD20A8PQ5CZ79 823 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 ZC3H12AQ5D1E8 599 aaKnown RBP7.09□□□□□ -1.27
USP16-203ENST00000399975 MFSD7Q6UXD7 560 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 FAM131BQ86XD5 332 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 CMTM8Q8IZV2 173 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 RNF157Q96PX1 679 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 OSBPL8Q9BZF1 889 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 ATXN3LQ9H3M9 355 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP16-203ENST00000399975 PSD3Q9NYI0 1048 aa7.09□□□□□ -1.27
USP16-203ENST00000399975 CHD5Q8TDI0 1954 aa7.09□□□□□ -1.28
USP16-203ENST00000399975 A0A1W2PRU2 124 aa7.08□□□□□ -1.28
USP16-203ENST00000399975 EFCAB8A8MWE9 144 aa7.08□□□□□ -1.28
USP16-203ENST00000399975 CCDC188H7C350 402 aa7.08□□□□□ -1.28
USP16-203ENST00000399975 NRG2O14511 850 aaPredicted RBP7.08□□□□□ -1.28
USP16-203ENST00000399975 FGF10O15520 208 aaPredicted RBP7.08□□□□□ -1.28
USP16-203ENST00000399975 LINC01565O15544 149 aa7.08□□□□□ -1.28
USP16-203ENST00000399975 MSI1O43347 362 aaKnown RBP7.08□□□□□ -1.28
USP16-203ENST00000399975 ACSL4O60488 711 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms