RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CYP4V2Q6ZWL3 525 aaPredicted RBP12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 STRADAQ7RTN6 431 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DENND1CQ8IV53 801 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 FNIP1Q8TF40 1166 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 FAM172AQ8WUF8 416 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CTNNBL1Q8WYA6 563 aaPredicted RBP12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 PPP1R9BQ96SB3 815 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 CNPY3Q9BT09 278 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 LACRTQ9GZZ8 138 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 EBF3Q9H4W6 596 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 MRPL47Q9HD33 250 aaKnown RBP12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 SLC2A4RGQ9NR83 387 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 DUS2Q9NX74 493 aaKnown RBP12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 ARHGEF38Q9NXL2 777 aa12.9□□□□□ -0.34
HLA-DQB1-203ENST00000399082 GOLGA6L7A0A1B0GV03 622 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MTA2O94776 668 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CYP17A1P05093 508 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TCF4P15884 667 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SLC6A4P31645 630 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 GGCXP38435 758 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 KPNA1P52294 538 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PPP2R5DQ14738 602 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PDGFRLQ15198 375 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PIK3R6Q5UE93 754 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 NUGGCQ68CJ6 796 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 NAIF1Q69YI7 327 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 FAM131BQ86XD5 332 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ADGRG2Q8IZP9 1017 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CCDC112Q8NEF3 446 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SLC35G2Q8TBE7 412 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ZNF564Q8TBZ8 553 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 RFFLQ8WZ73 363 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PRICKLE1Q96MT3 831 aaPredicted RBP12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PEBP4Q96S96 227 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MAGEB5Q9BZ81 275 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 BRD9Q9H8M2 597 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 GTSE1Q9NYZ3 720 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CTTNBP2NLQ9P2B4 639 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 UVRAGQ9P2Y5 699 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ANAPC7Q9UJX3 599 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SNX10Q9Y5X0 201 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ADGRG1Q9Y653 693 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 DUSP10Q9Y6W6 482 aa12.89□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MUC3AQ02505 3323 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PJA2O43164 708 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ARHGAP6O43182 974 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ACSL4O60488 711 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 LRCH4O75427 683 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 LATS1O95835 1130 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MOCS2O96007 188 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PSMA2P25787 234 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CCR1P32246 355 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 GBP1P32455 592 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SOX9P48436 509 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 IFNAR2P48551 515 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SGSHP51688 502 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 VAV2P52735 878 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 RUNX3Q13761 415 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 DHCR24Q15392 516 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 BRMS1LQ5PSV4 323 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 LY6G5CQ5SRR4 150 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 RHBDF2Q6PJF5 856 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TMEM25Q86YD3 366 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 YAF2Q8IY57 180 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ZNF683Q8IZ20 524 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CCDC185Q8N715 623 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 NIPA2Q8N8Q9 360 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TTC8Q8TAM2 541 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 AZIN2Q96A70 460 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 OTUB2Q96DC9 234 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ZNF830Q96NB3 372 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PRMT1Q99873 361 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 DCLK3Q9C098 648 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ECT2Q9H8V3 914 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TRPV5Q9NQA5 729 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 THG1LQ9NWX6 298 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TBC1D14Q9P2M4 693 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TRIM10Q9UDY6 481 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 LSM7Q9UK45 103 aaKnown RBP12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 KIAA1549LQ6ZVL6 1849 aa12.88□□□□□ -0.35
HLA-DQB1-203ENST00000399082 KRBA1A5PL33 1030 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TRDMT1O14717 391 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SLC9A3R1O14745 358 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 PAGE1O75459 146 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 F9P00740 461 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 APOEP02649 317 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 HARS2P49590 506 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 IRAK1P51617 712 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 HADHBP55084 474 aaKnown RBP12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ZXDAP98168 799 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 SPA17Q15506 151 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 MS4A13Q5J8X5 152 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 ADGRF1Q5T601 910 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 FYB2Q5VWT5 728 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 RNF43Q68DV7 783 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 CC2D1AQ6P1N0 951 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 RFWD3Q6PCD5 774 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 TXNDC11Q6PKC3 985 aa12.87□□□□□ -0.35
HLA-DQB1-203ENST00000399082 C14orf80Q86SX3 495 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms