RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SLC39A10Q9ULF5 831 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 M0QZ92 97 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 C2CD2LO14523 706 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TPP1O14773 563 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TCEA3O75764 348 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 GRM5P41594 1212 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TPI1P60174 286 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 CCDC15Q0P6D6 951 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TAF12Q16514 161 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 KHDC1Q4VXA5 237 aaKnown RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 VWA5B1Q5TIE3 1220 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TRMT10BQ6PF06 316 aaKnown RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TTC7BQ86TV6 843 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 CCDC185Q8N715 623 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 OR52K1Q8NGK4 314 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 IGFLR1Q9H665 355 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 RNPEPL1Q9HAU8 725 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 CPSF2Q9P2I0 782 aaKnown RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 STAP1Q9ULZ2 295 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 CLDN5O00501 218 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 TSPAN1O60635 241 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 WFS1O76024 890 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 OAS1P00973 400 aaKnown RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 EIF2B5Q13144 721 aaKnown RBP5.08□□□□□ -1.6
SMAD4-202ENST00000398417 PARP6Q2NL67 630 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 EFHC1Q5JVL4 640 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 PPP1R15BQ5SWA1 713 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ILDR2Q71H61 639 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 UCMAQ8WVF2 138 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 AZIN2Q96A70 460 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 NMUR2Q9GZQ4 415 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 AP5M1Q9H0R1 490 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 CXCL16Q9H2A7 254 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 ZNF112Q9UJU3 913 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 NUDT5Q9UKK9 219 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 PCDHA11Q9Y5I1 949 aa5.08□□□□□ -1.6
SMAD4-202ENST00000398417 GOLGA8TH3BQL2 631 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ITM2AO43736 263 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TCN1P20061 433 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ADORA2AP29274 412 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 GTF2A2P52657 109 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 CACNA2D1P54289 1103 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 POU5F1BQ06416 359 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 LAMC2Q13753 1193 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 SOWAHAQ2M3V2 549 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 GALNTL6Q49A17 601 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PPM1JQ5JR12 505 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TSHZ1Q6ZSZ6 1077 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TTC30AQ86WT1 665 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 METTL23Q86XA0 190 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 SCUBE1Q8IWY4 988 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TP53INP2Q8IXH6 220 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PCDH19Q8TAB3 1148 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 EBF4Q9BQW3 602 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 GBA2Q9HCG7 927 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 KANSL3Q9P2N6 904 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 KIAA1257Q9ULG3 409 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 RUVBL2Q9Y230 463 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 WASF2Q9Y6W5 498 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 MYH3P11055 1940 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 C2CD4BA6NLJ0 364 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 MAGEB2O15479 319 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 AP1G2O75843 785 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 SLC4A1P02730 911 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 BPGMP07738 259 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PSMB4P28070 264 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TKTL1P51854 596 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TPD52P55327 224 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ZBTB17Q13105 803 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 DNAL1Q4LDG9 190 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TLDC1Q6P9B6 456 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 BZW1Q7L1Q6 419 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 CMC1Q7Z7K0 106 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 RNF135Q8IUD6 432 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 DCLK2Q8N568 766 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 EDEM1Q92611 657 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 DDX50Q9BQ39 737 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 BATF3Q9NR55 127 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ITGA11Q9UKX5 1188 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 CHD4Q14839 1912 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 DIDO1Q9BTC0 2240 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 KCNK1O00180 336 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 CHADO15335 359 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TOP3BO95985 862 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 GOT1P17174 413 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 SLC1A6P48664 564 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 OLIG2Q13516 323 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ITGA9Q13797 1035 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 PDCD2Q16342 344 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 ZNF618Q5T7W0 954 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TWF2Q6IBS0 349 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 SPATA6LQ8N4H0 392 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 KCTD4Q8WVF5 259 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 WDR60Q8WVS4 1066 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 EBNA1BP2Q99848 306 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 EIF2AQ9BY44 585 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TRIM4Q9C037 500 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 TMA7Q9Y2S6 64 aaKnown RBP5.07□□□□□ -1.6
SMAD4-202ENST00000398417 USP54Q70EL1 1684 aa5.07□□□□□ -1.6
SMAD4-202ENST00000398417 GSC2O15499 205 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms