RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 SV2AQ7L0J3 742 aa16.89■□□□□ 0.29
CUX2-202ENST00000397643 FAM124AQ86V42 546 aa16.89■□□□□ 0.29
CUX2-202ENST00000397643 FAM217AQ8IXS0 508 aa16.89■□□□□ 0.29
CUX2-202ENST00000397643 GALNT15Q8N3T1 639 aa16.89■□□□□ 0.29
CUX2-202ENST00000397643 IQUBQ8NA54 791 aa16.89■□□□□ 0.29
CUX2-202ENST00000397643 TMEM174Q8WUU8 243 aa16.89■□□□□ 0.29
CUX2-202ENST00000397643 UCMAQ8WVF2 138 aa16.89■□□□□ 0.29
CUX2-202ENST00000397643 TAF4BQ92750 862 aa16.89■□□□□ 0.29
CUX2-202ENST00000397643 CYFIP2Q96F07 1278 aa16.89■□□□□ 0.29
CUX2-202ENST00000397643 AGO1Q9UL18 857 aaKnown RBP16.89■□□□□ 0.29
CUX2-202ENST00000397643 FAM237AA0A1B0GTK4 181 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 A0A1B0GVL5 298 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 GOLGA8CPA6NN73 597 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 GADD45BO75293 160 aaPredicted RBP16.88■□□□□ 0.29
CUX2-202ENST00000397643 RPN1P04843 607 aaKnown RBP16.88■□□□□ 0.29
CUX2-202ENST00000397643 EPHX1P07099 455 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 PFKFB1P16118 471 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 ACSL1P33121 698 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 CAMK2GQ13555 558 aaPredicted RBP16.88■□□□□ 0.29
CUX2-202ENST00000397643 LAYNQ6UX15 382 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 SLC9A9Q8IVB4 645 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 OR2T3Q8NH03 318 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 GOLGA5Q8TBA6 731 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 ADAM32Q8TC27 787 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 MAGEF1Q9HAY2 307 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 APOBEC3GQ9HC16 384 aaKnown RBP16.88■□□□□ 0.29
CUX2-202ENST00000397643 TM9SF3Q9HD45 589 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 OSGEPQ9NPF4 335 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 RASAL2Q9UJF2 1139 aa16.88■□□□□ 0.29
CUX2-202ENST00000397643 PVALEFA0A1B0GWK0 134 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 POLR2DO15514 142 aaKnown RBP16.87■□□□□ 0.29
CUX2-202ENST00000397643 TNFSF14O43557 240 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 ZIC2O95409 532 aaPredicted RBP16.87■□□□□ 0.29
CUX2-202ENST00000397643 HLA-DRAP01903 254 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 HMBSP08397 361 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 ACADMP11310 421 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 HLA-EP13747 358 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 GRK6P43250 576 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 SYKP43405 635 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 GRIA4P48058 902 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 COG7P83436 770 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 EFEMP1Q12805 493 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 CUL4BQ13620 913 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 KCNT1Q5JUK3 1230 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 SERPINA13PQ6UXR4 307 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 TADA2BQ86TJ2 420 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 CPXM2Q8N436 756 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 KIAA0895Q8NCT3 520 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 SNX19Q92543 992 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 ORAI3Q9BRQ5 295 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 CIPCQ9C0C6 399 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 TMEM245Q9H330 911 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 LMBRD1Q9NUN5 540 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 HPSEQ9Y251 543 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 ANKRD6Q9Y2G4 727 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 PTPRQQ9UMZ3 2332 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 CFAP46Q8IYW2 2715 aa16.87■□□□□ 0.29
CUX2-202ENST00000397643 KCNK3O14649 394 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 PCDHGA12O60330 932 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 RALAP11233 206 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 HOXD9P28356 352 aaPredicted RBP16.86■□□□□ 0.29
CUX2-202ENST00000397643 NDUFA8P51970 172 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 SUZ12Q15022 739 aaKnown RBP16.86■□□□□ 0.29
CUX2-202ENST00000397643 DENND1CQ8IV53 801 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 PDCD7Q8N8D1 485 aaKnown RBP16.86■□□□□ 0.29
CUX2-202ENST00000397643 TMC2Q8TDI7 906 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 IGSF8Q969P0 613 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 CDK5RAP1Q96SZ6 601 aaKnown RBP16.86■□□□□ 0.29
CUX2-202ENST00000397643 NT5C1AQ9BXI3 368 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 DUSP16Q9BY84 665 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 SLC2A11Q9BYW1 496 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 DCLK3Q9C098 648 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 LHX5Q9H2C1 402 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 KCTD10Q9H3F6 313 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 GOLPH3LQ9H4A5 285 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 USP25Q9UHP3 1055 aa16.86■□□□□ 0.29
CUX2-202ENST00000397643 H0Y8X5 98 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 PAPSS1O43252 624 aaPredicted RBP16.85■□□□□ 0.29
CUX2-202ENST00000397643 KLRC4O43908 158 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 TSPAN3O60637 253 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 PTMSP20962 102 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 HLA-FP30511 346 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 PIK3CAP42336 1068 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 CTSKP43235 329 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 CCT8P50990 548 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 STK4Q13043 487 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 E2F5Q15329 346 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 PPP1R26Q5T8A7 1209 aaPredicted RBP16.85■□□□□ 0.29
CUX2-202ENST00000397643 DHRS13Q6UX07 377 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 CEP57L1Q8IYX8 460 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 ZNF366Q8N895 744 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 BIRC7Q96CA5 298 aa16.85■□□□□ 0.29
CUX2-202ENST00000397643 TP53BP1Q12888 1972 aaPredicted RBP16.85■□□□□ 0.29
CUX2-202ENST00000397643 COL5A1P20908 1838 aaPredicted RBP16.84■□□□□ 0.29
CUX2-202ENST00000397643 IKBKBO14920 756 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 TIMM44O43615 452 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 C1QL1O75973 258 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 SEMA4FO95754 770 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 NR3C1P04150 777 aa16.84■□□□□ 0.29
CUX2-202ENST00000397643 CYBBP04839 570 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms