RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 NT5C1AQ9BXI3 368 aa8.4□□□□□ -1.06
CNTN4-201ENST00000397459 KLHL4Q9C0H6 718 aa8.4□□□□□ -1.06
CNTN4-201ENST00000397459 ELP3Q9H9T3 547 aa8.4□□□□□ -1.06
CNTN4-201ENST00000397459 GBA2Q9HCG7 927 aaPredicted RBP8.4□□□□□ -1.06
CNTN4-201ENST00000397459 PCDH18Q9HCL0 1135 aa8.4□□□□□ -1.06
CNTN4-201ENST00000397459 NSMCE4AQ9NXX6 385 aa8.4□□□□□ -1.06
CNTN4-201ENST00000397459 SLC7A8Q9UHI5 535 aa8.4□□□□□ -1.06
CNTN4-201ENST00000397459 VPS28Q9UK41 221 aa8.4□□□□□ -1.06
CNTN4-201ENST00000397459 A6NJR5 290 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 SKAP2O75563 359 aaPredicted RBP8.4□□□□□ -1.07
CNTN4-201ENST00000397459 PABPC4LP0CB38 370 aaKnown RBP8.4□□□□□ -1.07
CNTN4-201ENST00000397459 HARSP12081 509 aaKnown RBP8.4□□□□□ -1.07
CNTN4-201ENST00000397459 HARS2P49590 506 aaKnown RBP8.4□□□□□ -1.07
CNTN4-201ENST00000397459 ILF2Q12905 390 aaKnown RBP8.4□□□□□ -1.07
CNTN4-201ENST00000397459 ZNF394Q53GI3 561 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 SPANXN3Q5MJ09 141 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 GRTP1Q5TC63 336 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 LRRC8BQ6P9F7 803 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 PGM2L1Q6PCE3 622 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 IZUMO2Q6UXV1 221 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 UNC93AQ86WB7 457 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 IGDCC3Q8IVU1 814 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 KIAA0319LQ8IZA0 1049 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 DLG3Q92796 817 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 CCDC97Q96F63 343 aaPredicted RBP8.4□□□□□ -1.07
CNTN4-201ENST00000397459 PANX3Q96QZ0 392 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 THTPAQ9BU02 230 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 SLC4A5Q9BY07 1137 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 BRD8Q9H0E9 1235 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 THEGQ9P2T0 379 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 PCSK1NQ9UHG2 260 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 ARHGAP26Q9UNA1 814 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 TBC1D30Q9Y2I9 924 aa8.4□□□□□ -1.07
CNTN4-201ENST00000397459 UNCXA6NJT0 531 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 ZSWIM8A7E2V4 1837 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 ERI2A8K979 691 aaKnown RBP8.39□□□□□ -1.07
CNTN4-201ENST00000397459 MPOP05164 745 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 APRTP07741 180 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 COL1A2P08123 1366 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 CYP2C9P11712 490 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 UQCRBP14927 111 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 TNFSF9P41273 254 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 SLC1A6P48664 564 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 POLD2P49005 469 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 AIF1P55008 147 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 SLC6A3Q01959 620 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 GAD2Q05329 585 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 CDC16Q13042 620 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 GRM2Q14416 872 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 HERC3Q15034 1050 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 ZNF484Q5JVG2 852 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 MBLAC2Q68D91 279 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 HEATR6Q6AI08 1181 aaKnown RBP8.39□□□□□ -1.07
CNTN4-201ENST00000397459 OR6B2Q6IFH4 312 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 C16orf89Q6UX73 402 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 GADL1Q6ZQY3 521 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 PDZD4Q76G19 769 aaPredicted RBP8.39□□□□□ -1.07
CNTN4-201ENST00000397459 ZBTB33Q86T24 672 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 TMEM110Q86TL2 294 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 ALYREFQ86V81 257 aaKnown RBP8.39□□□□□ -1.07
CNTN4-201ENST00000397459 PDSS2Q86YH6 399 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 RNF149Q8NC42 400 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 ZC3H15Q8WU90 426 aaKnown RBP8.39□□□□□ -1.07
CNTN4-201ENST00000397459 GFM2Q969S9 779 aaKnown RBP8.39□□□□□ -1.07
CNTN4-201ENST00000397459 ACSF2Q96CM8 615 aaPredicted RBP8.39□□□□□ -1.07
CNTN4-201ENST00000397459 OTUD5Q96G74 571 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 MAML3Q96JK9 1138 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 ZFRQ96KR1 1074 aaKnown RBP8.39□□□□□ -1.07
CNTN4-201ENST00000397459 PCYT2Q99447 389 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 CPNE1Q99829 537 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 RTKNQ9BST9 563 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 SMARCAD1Q9H4L7 1026 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 TXNDC16Q9P2K2 825 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 NXF1Q9UBU9 619 aaKnown RBP8.39□□□□□ -1.07
CNTN4-201ENST00000397459 HESX1Q9UBX0 185 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 CYTH4Q9UIA0 394 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 A0A0G2JMZ2 1700 aa8.39□□□□□ -1.07
CNTN4-201ENST00000397459 A0A0A0MRY4 1105 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 A0A0G2JLL6 359 aaPredicted RBP8.38□□□□□ -1.07
CNTN4-201ENST00000397459 SPDYE5A6NIY4 337 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 BTBD19C9JJ37 291 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 MTSS1O43312 755 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 PLIN3O60664 434 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 CD48P09326 243 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 TCF7P36402 384 aaPredicted RBP8.38□□□□□ -1.07
CNTN4-201ENST00000397459 CPOXP36551 454 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 GP5P40197 560 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 RAB27AP51159 221 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 SP4Q02446 784 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 NIPAL4Q0D2K0 466 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 PCBP1Q15365 356 aaKnown RBP eCLIP8.38□□□□□ -1.07
CNTN4-201ENST00000397459 LIN52Q52LA3 116 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 FASTKD1Q53R41 847 aaKnown RBP8.38□□□□□ -1.07
CNTN4-201ENST00000397459 RABGAP1LQ5R372 815 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 ARHGAP17Q68EM7 881 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 SCARA3Q6AZY7 606 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 LBX2Q6XYB7 198 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 SCARA5Q6ZMJ2 495 aa8.38□□□□□ -1.07
CNTN4-201ENST00000397459 CYP4V2Q6ZWL3 525 aaPredicted RBP8.38□□□□□ -1.07
CNTN4-201ENST00000397459 STRADAQ7RTN6 431 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms