RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 SULT1E1P49888 294 aa26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 PITX1P78337 314 aaPredicted RBP26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 MTAPQ13126 283 aa26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 TRIM14Q14142 442 aa26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 MPPE1Q53F39 396 aa26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 GRAMD4Q6IC98 578 aa26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 ZNF571Q7Z3V5 609 aaPredicted RBP26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 VPS36Q86VN1 386 aa26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 SLC39A13Q96H72 371 aa26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 SELENOOQ9BVL4 669 aa26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 IRF2BPLQ9H1B7 796 aa26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 RBSNQ9H1K0 784 aa26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 METTL5Q9NRN9 209 aaKnown RBP26.36■■□□□ 1.81
TSPAN4-207ENST00000397411 GOLGA6L7A0A1B0GV03 622 aa26.35■■□□□ 1.81
TSPAN4-207ENST00000397411 ATG13O75143 517 aa26.35■■□□□ 1.81
TSPAN4-207ENST00000397411 CCR1P32246 355 aa26.35■■□□□ 1.81
TSPAN4-207ENST00000397411 PTPN5P54829 565 aa26.35■■□□□ 1.81
TSPAN4-207ENST00000397411 C1QBPQ07021 282 aaKnown RBP26.35■■□□□ 1.81
TSPAN4-207ENST00000397411 ANGPT1Q15389 498 aa26.35■■□□□ 1.81
TSPAN4-207ENST00000397411 RNF40O75150 1001 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 F9P00740 461 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 IGLV3-25P01717 112 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 GYPCP04921 128 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 SERPING1P05155 500 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 KRT3P12035 628 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 SEC13P55735 322 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 DEUP1Q05D60 604 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 PPP2R5DQ14738 602 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 E4F1Q66K89 784 aaPredicted RBP26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 Q6ZS52 159 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 VSTM4Q8IW00 320 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 ETFBKMTQ8IXQ9 262 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 FAM217AQ8IXS0 508 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 SPEM1Q8N4L4 309 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 PRSS33Q8NF86 280 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 BTN2A3PQ96KV6 586 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 STOML2Q9UJZ1 356 aa26.34■■□□□ 1.81
TSPAN4-207ENST00000397411 TYW5A2RUC4 315 aaKnown RBP26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 ANKRD62A6NC57 917 aa26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 H0Y858 1186 aa26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 CACNG3O60359 315 aa26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 CXCL12P48061 93 aa26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 DGKGP49619 791 aa26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 CCR3P51677 355 aa26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 SLC25A52Q3SY17 297 aa26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 RFWD3Q6PCD5 774 aa26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 NPY6RQ99463 290 aa26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 TMEM51Q9NW97 253 aa26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 ZNHIT6Q9NWK9 470 aaKnown RBP26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 TMEM59LQ9UK28 342 aa26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 PAXBP1Q9Y5B6 917 aa26.33■■□□□ 1.81
TSPAN4-207ENST00000397411 PENKP01210 267 aaPredicted RBP26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 PDGFRAP16234 1089 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 TNFRSF4P43489 277 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 CSTF1Q05048 431 aaKnown RBP26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 PTP4A2Q12974 167 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 MTA1Q13330 715 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 FYB2Q5VWT5 728 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 DNAJC24Q6P3W2 148 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 SARM1Q6SZW1 724 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 MON1BQ7L1V2 547 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 ARCQ7LC44 396 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 CCDC117Q8IWD4 279 aaPredicted RBP26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 MCOLN2Q8IZK6 566 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 EMC1Q8N766 993 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 TBCBQ99426 244 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 SYT11Q9BT88 431 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 WDCPQ9H6R7 721 aa26.32■■□□□ 1.8
TSPAN4-207ENST00000397411 KCNU1A8MYU2 1149 aa26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 K7EQS6 105 aa26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 FLT3P36888 993 aa26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 C2orf27AQ580R0 203 aa26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 C10orf76Q5T2E6 689 aa26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 CHSY1Q86X52 802 aa26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 RPLP0P6Q8NHW5 317 aa26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 RXFP2Q8WXD0 754 aa26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 ATOH1Q92858 354 aaPredicted RBP26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 VCPIP1Q96JH7 1222 aa26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 IRX2Q9BZI1 471 aaPredicted RBP26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 TAS2R14Q9NYV8 317 aa26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 STIM2Q9P246 746 aa26.31■■□□□ 1.8
TSPAN4-207ENST00000397411 CACNA1IQ9P0X4 2223 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 TRIM24O15164 1050 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 TBL1XO60907 577 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 GJB6O95452 261 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 FTLP02792 175 aaPredicted RBP26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 GZMAP12544 262 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 SDC4P31431 198 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 ATP11AP98196 1134 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 PIK3R6Q5UE93 754 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 NADSYN1Q6IA69 706 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 C3orf20Q8ND61 904 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 OR8K1Q8NGG5 319 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 CFAP57Q96MR6 1250 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 SLC2A11Q9BYW1 496 aa26.3■■□□□ 1.8
TSPAN4-207ENST00000397411 A0A0A0MRY4 1105 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 SIGLEC16A6NMB1 481 aa26.29■■□□□ 1.8
TSPAN4-207ENST00000397411 DDX3XO00571 662 aaKnown RBP eCLIP26.29■■□□□ 1.81e-6■■■■□ 19.5
TSPAN4-207ENST00000397411 RTN2O75298 545 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms