RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ACOT2P49753 483 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 CYP4F2P78329 520 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 CYP4F3Q08477 520 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 WASHC2DQ5SRD0 308 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 BCORL1Q5H9F3 1711 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 DPYDQ12882 1025 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 ACAP1Q15027 740 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 C11orf63Q6NUN7 778 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 LLGL2Q6P1M3 1020 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 STK32CQ86UX6 486 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 AMER2Q8N7J2 671 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 KBTBD8Q8NFY9 601 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 PAFAH2Q99487 392 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 BTBD10Q9BSF8 475 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 NFKBIZQ9BYH8 718 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 PLCL2Q9UPR0 1127 aa10.57□□□□□ -0.72
COL4A4-201ENST00000396625 HIST1H2ABP04908 130 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 PCSK1P29120 753 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 CAPGP40121 348 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 ALDH1A3P47895 512 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 KCNJ1P48048 391 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 MCCD1P59942 119 aaPredicted RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 INO80DQ53TQ3 878 aaPredicted RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 HIST3H2AQ7L7L0 130 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 DSG4Q86SJ6 1040 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 HIST1H2ACQ93077 130 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 RFT1Q96AA3 541 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 OXNAD1Q96HP4 312 aaPredicted RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 PDLIM2Q96JY6 352 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 NAGPAQ9UK23 515 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 PRDM15P57071 1507 aaPredicted RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 TMCC2O75069 709 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 SWI5Q1ZZU3 235 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 SV2CQ496J9 727 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 APBB2Q92870 758 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 NLNQ9BYT8 704 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 IRX2Q9BZI1 471 aaPredicted RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 BICRAQ9NZM4 1560 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 SSU72P8A0A1W2PR75 194 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 ATP5F1P24539 256 aaPredicted RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 BROXQ5VW32 411 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 NOA1Q8NC60 698 aaKnown RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 ACOX2Q99424 681 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 CD4P01730 458 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 RLN1P04808 185 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 CLK2P49760 499 aaKnown RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 ATP2C1P98194 919 aaPredicted RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 GPAT2Q6NUI2 795 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 ADHFE1Q8IWW8 467 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 BHLHE22Q8NFJ8 381 aaPredicted RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 OTUD5Q96G74 571 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 MKNK1Q9BUB5 465 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 REEP1Q9H902 201 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 WDR41Q9HAD4 459 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 SENP2Q9HC62 589 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 SLC35C2Q9NQQ7 365 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 AGPAT5Q9NUQ2 364 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 CLN6Q9NWW5 311 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 TBC1D24Q9ULP9 559 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 ARAP3Q8WWN8 1544 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 ERI2A8K979 691 aaKnown RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 USP17L10C9JJH3 530 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 VPS4BO75351 444 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 TEX46H3BTG2 121 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 TKTP29401 623 aaKnown RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 MCAMP43121 646 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 CBWD2Q8IUF1 395 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 FAM81AQ8TBF8 368 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 RSL24D1Q9UHA3 163 aaKnown RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 VANGL2Q9ULK5 521 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 C2CD2Q9Y426 696 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 MDM4O15151 490 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 DNAJC14Q6Y2X3 702 aaPredicted RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 AHSPQ9NZD4 102 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 MGAT4AQ9UM21 535 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 SASH1O94885 1247 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 SRGNP10124 158 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 S100A2P29034 98 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 IL12AP29459 219 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 LRPAP1P30533 357 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 USP11P51784 963 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 IRAK1BP1Q5VVH5 260 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 CYP2R1Q6VVX0 501 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 MTSS1LQ765P7 747 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 CXXC5Q7LFL8 322 aaKnown RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 HIPK1Q86Z02 1210 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 SEMA4DQ92854 862 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 HPS1Q92902 700 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 Q96MT0 163 aa10.56□□□□□ -0.72
COL4A4-201ENST00000396625 FRMD8P1Q9BZ68 369 aaPredicted RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 WDR12Q9GZL7 423 aaKnown RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 MRPS7Q9Y2R9 242 aaKnown RBP10.56□□□□□ -0.72
COL4A4-201ENST00000396625 POLRMTO00411 1230 aaKnown RBP10.55□□□□□ -0.72
COL4A4-201ENST00000396625 SLC2A4P14672 509 aa10.55□□□□□ -0.72
COL4A4-201ENST00000396625 DLG1Q12959 904 aa10.55□□□□□ -0.72
COL4A4-201ENST00000396625 STARD3Q14849 445 aa10.55□□□□□ -0.72
COL4A4-201ENST00000396625 SAMD4BQ5PRF9 694 aaKnown RBP10.55□□□□□ -0.72
COL4A4-201ENST00000396625 TTC23Q5W5X9 447 aa10.55□□□□□ -0.72
COL4A4-201ENST00000396625 POC5Q8NA72 575 aa10.55□□□□□ -0.72
COL4A4-201ENST00000396625 TPCN2Q8NHX9 752 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms