RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 PRDM12Q9H4Q4 367 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 PIH1D1Q9NWS0 290 aaKnown RBP6.75□□□□□ -1.33
BDNF-203ENST00000395978 TRHDEQ9UKU6 1024 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 DSEQ9UL01 958 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 DNAJC16Q9Y2G8 782 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 LAMB1P07942 1786 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 MYH7BA7E2Y1 1941 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 DDX60LQ5H9U9 1706 aaKnown RBP6.75□□□□□ -1.33
BDNF-203ENST00000395978 FCHO1O14526 889 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 PDHA1P08559 390 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 SLC2A3P11169 496 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 RALBP11234 206 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 AKR1A1P14550 325 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 GOT1P17174 413 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 IL1R2P27930 398 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 SERPINB3P29508 390 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 PTPN7P35236 360 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 CRYBB1P53674 252 aaPredicted RBP6.75□□□□□ -1.33
BDNF-203ENST00000395978 RPL10AP62906 217 aaKnown RBP6.75□□□□□ -1.33
BDNF-203ENST00000395978 KCNJ2P63252 427 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 OCRLQ01968 901 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 MPP3Q13368 585 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 ZNF235Q14590 738 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 FNBP1LQ5T0N5 605 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 N4BP2L1Q5TBK1 243 aaPredicted RBP6.75□□□□□ -1.33
BDNF-203ENST00000395978 VSTM1Q6UX27 236 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 SLC26A9Q7LBE3 791 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 STRADAQ7RTN6 431 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 TEX9Q8N6V9 391 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 STKLD1Q8NE28 680 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 CALML6Q8TD86 181 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 SMARCD1Q96GM5 515 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 LRGUKQ96M69 825 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 ZNF317Q96PQ6 595 aaPredicted RBP6.75□□□□□ -1.33
BDNF-203ENST00000395978 TMEM237Q96Q45 408 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 TWNKQ96RR1 684 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 EFHD1Q9BUP0 239 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 DCLRE1BQ9H816 532 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 THAP1Q9NVV9 213 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 ABI2Q9NYB9 513 aaPredicted RBP6.75□□□□□ -1.33
BDNF-203ENST00000395978 TJP2Q9UDY2 1190 aa6.75□□□□□ -1.33
BDNF-203ENST00000395978 PRG3Q9Y2Y8 225 aaPredicted RBP6.75□□□□□ -1.33
BDNF-203ENST00000395978 LAMB2P55268 1798 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 STBD1O95210 358 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 CHRM1P11229 460 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 YBX3P16989 372 aaKnown RBP eCLIP6.74□□□□□ -1.33
BDNF-203ENST00000395978 HOXD10P28358 340 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 OR1G1P47890 313 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 ZNF132P52740 706 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 ZNF135P52742 658 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 GEMP55040 296 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 GBE1Q04446 702 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 MAP2K5Q13163 448 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 KLF1Q13351 362 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 OASLQ15646 514 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 SLC1A5Q15758 541 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 FAM187BQ17R55 369 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 FAM110CQ1W6H9 321 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 RABGAP1LQ5R372 815 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 ADGRD1Q6QNK2 874 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 KYAT3Q6YP21 454 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 SLC44A1Q8WWI5 657 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 INPP5DQ92835 1189 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.74□□□□□ -1.33
BDNF-203ENST00000395978 TSPAN18Q96SJ8 248 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 VAT1Q99536 393 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 TRIM56Q9BRZ2 755 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 NFKBIZQ9BYH8 718 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 BCO2Q9BYV7 579 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 ILKAPQ9H0C8 392 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 XYLT2Q9H1B5 865 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 CCDC134Q9H6E4 229 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 ARHGEF38Q9NXL2 777 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 HMGXB4Q9UGU5 601 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 SIX4Q9UIU6 781 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 KCNH4Q9UQ05 1017 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 CNTN6Q9UQ52 1028 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 L3MBTL1Q9Y468 752 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 RGPD3A6NKT7 1758 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 RGPD4Q7Z3J3 1758 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 BCLAF3A2AJT9 711 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 NEMP1O14524 444 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 XPO1O14980 1071 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 MDM4O15151 490 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 NVLO15381 856 aaKnown RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 POMCP01189 267 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 CDH5P33151 784 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 MLH1P40692 756 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 PEX19P40855 299 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 PTPN9P43378 593 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 GDF10P55107 478 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 WNT7BP56706 349 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 SNX17Q15036 470 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 SIX1Q15475 284 aaPredicted RBP6.74□□□□□ -1.33
BDNF-203ENST00000395978 PCSK7Q16549 785 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 OVOS1Q6IE37 1185 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 OTOAQ7RTW8 1153 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 GLIS1Q8NBF1 620 aa6.74□□□□□ -1.33
BDNF-203ENST00000395978 LRRN4Q8WUT4 740 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms