RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CTSKP43235 329 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 PSEN1P49768 467 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 AMPD3Q01432 767 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 INCA1Q0VD86 236 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 C19orf57Q0VDD7 668 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 EFEMP1Q12805 493 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 TEAD4Q15561 434 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 KNOP1Q1ED39 458 aaKnown RBP16.59■□□□□ 0.25
SNCA-205ENST00000394991 SGSM1Q2NKQ1 1148 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 DENND1CQ8IV53 801 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 CPXM2Q8N436 756 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 ZNF366Q8N895 744 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 ORAI3Q9BRQ5 295 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 DCLK3Q9C098 648 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 BLZF1Q9H2G9 400 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 DMAC2Q9NW81 257 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 CLIC5Q9NZA1 410 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 USP3Q9Y6I4 520 aa16.59■□□□□ 0.25
SNCA-205ENST00000394991 TENM4Q6N022 2769 aa16.58■□□□□ 0.25
SNCA-205ENST00000394991 PAPSS1O43252 624 aaPredicted RBP16.58■□□□□ 0.24
SNCA-205ENST00000394991 TLX3O43711 291 aaPredicted RBP16.58■□□□□ 0.24
SNCA-205ENST00000394991 TSPAN3O60637 253 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 SEMA4FO95754 770 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 RALAP11233 206 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 COG7P83436 770 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 C1orf220Q5T0J3 134 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 TADA2BQ86TJ2 420 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 FAM217AQ8IXS0 508 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 LINC00301Q8NCQ3 95 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 CYB5D2Q8WUJ1 264 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 SLC39A7Q92504 469 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 SLC2A11Q9BYW1 496 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 TMEM245Q9H330 911 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 PRORYQ9H606 182 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 APOBEC3GQ9HC16 384 aaKnown RBP16.58■□□□□ 0.24
SNCA-205ENST00000394991 FTSJ1Q9UET6 329 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 MTMR6Q9Y217 621 aa16.58■□□□□ 0.24
SNCA-205ENST00000394991 MAST4O15021 2626 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 CBX4O00257 560 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 ATXN7O15265 892 aaPredicted RBP16.57■□□□□ 0.24
SNCA-205ENST00000394991 STX6O43752 255 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 FSBPO95073 299 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 HLA-DRAP01903 254 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 CYBBP04839 570 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 HOXD9P28356 352 aaPredicted RBP16.57■□□□□ 0.24
SNCA-205ENST00000394991 RPS14P62263 151 aaKnown RBP16.57■□□□□ 0.24
SNCA-205ENST00000394991 STK38Q15208 465 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 SHC4Q6S5L8 630 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 SV2AQ7L0J3 742 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 TMPRSS12Q86WS5 348 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 DDI1Q8WTU0 396 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 TAF4BQ92750 862 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 RAI2Q9Y5P3 530 aa16.57■□□□□ 0.24
SNCA-205ENST00000394991 KIF20AO95235 890 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 RPN1P04843 607 aaKnown RBP16.56■□□□□ 0.24
SNCA-205ENST00000394991 CD27P26842 260 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 HLA-FP30511 346 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 PIK3CAP42336 1068 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 E2F5Q15329 346 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 FNDC3BQ53EP0 1204 aaKnown RBP16.56■□□□□ 0.24
SNCA-205ENST00000394991 PPP1R26Q5T8A7 1209 aaPredicted RBP16.56■□□□□ 0.24
SNCA-205ENST00000394991 GATAD2AQ86YP4 633 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 ZC3H3Q8IXZ2 948 aaKnown RBP16.56■□□□□ 0.24
SNCA-205ENST00000394991 IQUBQ8NA54 791 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 ENGASEQ8NFI3 743 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 NXPE2Q96DL1 559 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 CDK5RAP1Q96SZ6 601 aaKnown RBP16.56■□□□□ 0.24
SNCA-205ENST00000394991 NT5C1AQ9BXI3 368 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 DUSP16Q9BY84 665 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 BACH2Q9BYV9 841 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 BTBD1Q9H0C5 482 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 PRSS16Q9NQE7 514 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 MARCH2Q9P0N8 246 aa16.56■□□□□ 0.24
SNCA-205ENST00000394991 A0A1B0GTQ1 180 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 SLC12A8A0AV02 714 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 TK2O00142 265 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 SPTLC2O15270 562 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 TIMM44O43615 452 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 IGHV4-34P06331 123 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 EIF2S3P41091 472 aaKnown RBP16.55■□□□□ 0.24
SNCA-205ENST00000394991 ARID5AQ03989 594 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 CUL4BQ13620 913 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 PRAMEF14Q5SWL7 426 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 ADIPOR2Q86V24 386 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 SLC9A9Q8IVB4 645 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 GOLGA5Q8TBA6 731 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 TMC2Q8TDI7 906 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 ARID3AQ99856 593 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 PCDHGA1Q9Y5H4 931 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 DOCK9Q9BZ29 2069 aa16.55■□□□□ 0.24
SNCA-205ENST00000394991 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.54■□□□□ 0.24
SNCA-205ENST00000394991 PVALEFA0A1B0GWK0 134 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 ENC1O14682 589 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 PPP6R2O75170 966 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 PLA2G2AP14555 144 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 CD58P19256 250 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 DNAJC3Q13217 504 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 SHBQ15464 509 aa16.54■□□□□ 0.24
SNCA-205ENST00000394991 TRIP4Q15650 581 aaPredicted RBP16.54■□□□□ 0.24
SNCA-205ENST00000394991 INAVAQ3KP66 663 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms