RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PLD4Q96BZ4 506 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 SLC39A13Q96H72 371 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 FCRL2Q96LA5 508 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 MRGPRX1Q96LB2 322 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 XPO6Q96QU8 1125 aaKnown RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 CDK5RAP1Q96SZ6 601 aaKnown RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 ADAM33Q9BZ11 813 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 DCLK3Q9C098 648 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 MKRN2Q9H000 416 aaKnown RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 MIS12Q9H081 205 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 FSCN3Q9NQT6 498 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 ABCC13Q9NSE7 274 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 THAP10Q9P2Z0 257 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 NAALADL1Q9UQQ1 740 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 ZNF510Q9Y2H8 683 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 HBS1LQ9Y450 684 aaKnown RBP9.24□□□□□ -0.93
ATG4A-205ENST00000394892 STON1Q9Y6Q2 735 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 EML5Q05BV3 1969 aa9.24□□□□□ -0.93
ATG4A-205ENST00000394892 LNP1A1A4G5 178 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 C4orf47A7E2U8 309 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 KCNJ18B7U540 433 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 E5RJQ4 531 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 FOXN3O00409 490 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-205ENST00000394892 LETM1O95202 739 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-205ENST00000394892 IGLV3-25P01717 112 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 KRT5P13647 590 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 CEACAM1P13688 526 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 ITPKAP23677 461 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 PRKCHP24723 683 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 CLCN1P35523 988 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 CHKAP35790 457 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 COPAP53621 1224 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 IRX4P78413 519 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 GOLGA8FQ08AF8 430 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 GOLGA8DPQ0D2H9 430 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 ZNF252P-AS1Q0IIN9 211 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 FOXC1Q12948 553 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 ZNF234Q14588 700 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 PTPRNQ16849 979 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 FUT11Q495W5 492 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 HSP90AA4PQ58FG1 418 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 ARTNQ5T4W7 220 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 ARMCX6Q7L4S7 300 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 TADA2BQ86TJ2 420 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 TMEM110Q86TL2 294 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 TAC4Q86UU9 113 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 ADIPOR2Q86V24 386 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 CHPFQ8IZ52 775 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.23□□□□□ -0.93
ATG4A-205ENST00000394892 MLKLQ8NB16 471 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 ADAM32Q8TC27 787 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 IRGQQ8WZA9 623 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 PRICKLE1Q96MT3 831 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-205ENST00000394892 IPO9Q96P70 1041 aaKnown RBP9.23□□□□□ -0.93
ATG4A-205ENST00000394892 POLMQ9NP87 494 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-205ENST00000394892 TMEM9BQ9NQ34 198 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 ELOVL2Q9NXB9 296 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 INTS6Q9UL03 887 aaKnown RBP9.23□□□□□ -0.93
ATG4A-205ENST00000394892 ZMIZ1Q9ULJ6 1067 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 STRIP2Q9ULQ0 834 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 ABCA7Q8IZY2 2146 aa9.23□□□□□ -0.93
ATG4A-205ENST00000394892 ALDH1A2O94788 518 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 C7P10643 843 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 HLA-EP13747 358 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 CD70P32970 193 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 RDXP35241 583 aaKnown RBP9.22□□□□□ -0.93
ATG4A-205ENST00000394892 DHPSP49366 369 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-205ENST00000394892 SLC8A3P57103 927 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 RPS24P62847 133 aaKnown RBP9.22□□□□□ -0.93
ATG4A-205ENST00000394892 STILQ15468 1287 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 ARHGAP44Q17R89 818 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 ADGRF1Q5T601 910 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 SH3PXD2AQ5TCZ1 1133 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 PIK3R6Q5UE93 754 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 OTUD1Q5VV17 481 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-205ENST00000394892 PEAR1Q5VY43 1037 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-205ENST00000394892 CYP2U1Q7Z449 544 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 ZNF366Q8N895 744 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 GPT2Q8TD30 523 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 DDI1Q8WTU0 396 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 STK32AQ8WU08 396 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 RNF139Q8WU17 664 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 CYB5D2Q8WUJ1 264 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 PIGKQ92643 395 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 MYO19Q96H55 970 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 CPXM1Q96SM3 734 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 DNAI2Q9GZS0 605 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 NUCKS1Q9H1E3 243 aaKnown RBP9.22□□□□□ -0.93
ATG4A-205ENST00000394892 MTG2Q9H4K7 406 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 SLC32A1Q9H598 525 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 SAMSN1Q9NSI8 373 aaKnown RBP9.22□□□□□ -0.93
ATG4A-205ENST00000394892 OLA1Q9NTK5 396 aaKnown RBP9.22□□□□□ -0.93
ATG4A-205ENST00000394892 BCCIPQ9P287 314 aaKnown RBP eCLIP9.22□□□□□ -0.93
ATG4A-205ENST00000394892 APEX2Q9UBZ4 518 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 PILRBQ9UKJ0 227 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 CYP8B1Q9UNU6 501 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 SLCO1B1Q9Y6L6 691 aa9.22□□□□□ -0.93
ATG4A-205ENST00000394892 ATXN2Q99700 1313 aaKnown RBP9.22□□□□□ -0.93
ATG4A-205ENST00000394892 MAP1BP46821 2468 aaKnown RBP9.22□□□□□ -0.93
ATG4A-205ENST00000394892 CHD8Q9HCK8 2581 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms