RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CEP170BQ9Y4F5 1589 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-203ENST00000394872 NFASCO94856 1347 aa10.65□□□□□ -0.7
COL4A6-203ENST00000394872 MPOP05164 745 aa10.65□□□□□ -0.7
COL4A6-203ENST00000394872 OR56A5P0C7T3 313 aa10.65□□□□□ -0.7
COL4A6-203ENST00000394872 SLC2A4P14672 509 aa10.65□□□□□ -0.7
COL4A6-203ENST00000394872 HSPA13P48723 471 aa10.65□□□□□ -0.7
COL4A6-203ENST00000394872 C1QBPQ07021 282 aaKnown RBP10.65□□□□□ -0.7
COL4A6-203ENST00000394872 ZNF571Q7Z3V5 609 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-203ENST00000394872 PPP1R14AQ96A00 147 aa10.65□□□□□ -0.7
COL4A6-203ENST00000394872 BBS2Q9BXC9 721 aa10.65□□□□□ -0.7
COL4A6-203ENST00000394872 EFCAB1Q9HAE3 211 aa10.65□□□□□ -0.7
COL4A6-203ENST00000394872 MRPL42Q9Y6G3 142 aaKnown RBP10.65□□□□□ -0.7
COL4A6-203ENST00000394872 MAGEB16A2A368 324 aa10.65□□□□□ -0.71
COL4A6-203ENST00000394872 MTA2O94776 668 aa10.65□□□□□ -0.71
COL4A6-203ENST00000394872 BDNFP23560 247 aa10.65□□□□□ -0.71
COL4A6-203ENST00000394872 POU1F1P28069 291 aa10.65□□□□□ -0.71
COL4A6-203ENST00000394872 FGD2Q7Z6J4 655 aa10.65□□□□□ -0.71
COL4A6-203ENST00000394872 ENGASEQ8NFI3 743 aa10.65□□□□□ -0.71
COL4A6-203ENST00000394872 INTS13Q9NVM9 706 aa10.65□□□□□ -0.71
COL4A6-203ENST00000394872 A0A0A6YYK5 440 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-203ENST00000394872 ABCB1P08183 1280 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-203ENST00000394872 SEC24CP53992 1094 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 PALB2Q86YC2 1186 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 SLC2A14Q8TDB8 520 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 TBC1D23Q9NUY8 699 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 NFKBIL1Q9UBC1 381 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-203ENST00000394872 DUSP10Q9Y6W6 482 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 USP32Q8NFA0 1604 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 USP17L7P0C7H9 530 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 RARRES1P49788 294 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 BCL2L1Q07817 233 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 NR6A1Q15406 480 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 PKN1Q16512 942 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 GANQ9H2C0 597 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 ASB7Q9H672 318 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 ARMC7Q9H6L4 198 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 UMODL1Q5DID0 1318 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 TMEM150BA6NC51 233 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 RAD51BO15315 384 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 VGLL4Q14135 290 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 MYBPC2Q14324 1141 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 CCNG2Q16589 344 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 NIPA1Q7RTP0 329 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 SCUBE3Q8IX30 993 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 LRRC34Q8IZ02 419 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 CYP2W1Q8TAV3 490 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 C1QTNF7Q9BXJ2 289 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 MRPL17Q9NRX2 175 aaKnown RBP10.64□□□□□ -0.71
COL4A6-203ENST00000394872 A8MX80 341 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 E9PBE3 544 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 KPNA3O00505 521 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-203ENST00000394872 BMP10O95393 424 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 CD151P48509 253 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 YWHAZP63104 245 aaKnown RBP10.64□□□□□ -0.71
COL4A6-203ENST00000394872 CEP78Q5JTW2 689 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 HLA-DQA1Q5Y7H0 255 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 ZCCHC8Q6NZY4 707 aaKnown RBP10.64□□□□□ -0.71
COL4A6-203ENST00000394872 TPGS1Q6ZTW0 290 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 SLC26A11Q86WA9 606 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 ZNF786Q8N393 782 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 SLC5A5Q92911 643 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 SH3BP4Q9P0V3 963 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 ACKR2O00590 384 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 CPA3P15088 417 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 ZNF7P17097 686 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-203ENST00000394872 MGAT5Q09328 741 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 ARHGEF19Q8IW93 802 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 MCOLN2Q8IZK6 566 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 SPACA7Q96KW9 195 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 TBL1YQ9BQ87 522 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 NCKIPSDQ9NZQ3 722 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 SATB2Q9UPW6 733 aa10.64□□□□□ -0.71
COL4A6-203ENST00000394872 A0A1B0GW55 424 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 FAM86B1E9PN63 330 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 SLITRK3O94933 977 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 FAM86B2P0C5J1 330 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 DUX4L2P0CJ85 424 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 DUX4L3P0CJ86 424 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 DUX4L4P0CJ87 422 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 DUX4L5P0CJ88 424 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 DUX4L6P0CJ89 424 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 DUX4L7P0CJ90 424 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 PYGMP11217 842 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 AMPD1P23109 780 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 CDH8P55286 799 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 CDH17Q12864 832 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 MMRN1Q13201 1228 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 OTOP1Q7RTM1 612 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 CAMKK1Q8N5S9 505 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 SH3GL1Q99961 368 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 PIF1Q9H611 641 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 DUX4Q9UBX2 424 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 SEPT3Q9UH03 358 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 USP20Q9Y2K6 914 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 MROH7Q68CQ1 1323 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 RPN2P04844 631 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 LGALS2P05162 132 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 NFICP08651 508 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 ZNF268Q14587 947 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-203ENST00000394872 SETMARQ53H47 684 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms