RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 TMEM114B3SHH9 223 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 OPHN1O60890 802 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 NFICP08651 508 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 PIM1P11309 404 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 L1CAMP32004 1257 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 CPOXP36551 454 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 ARL4AP40617 200 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 MBTD1Q05BQ5 628 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 CUL3Q13618 768 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 C15orf59Q2T9L4 293 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 CFAP157Q5JU67 520 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 NBPF12Q5TAG4 269 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 GRTP1Q5TC63 336 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 JADE1Q6IE81 842 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 LRRC8BQ6P9F7 803 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 SETD3Q86TU7 594 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 PDSS2Q86YH6 399 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 TMEM126BQ8IUX1 230 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 UBA3Q8TBC4 463 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 TFB1MQ8WVM0 346 aaKnown RBP10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 APOL6Q9BWW8 343 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 SLC4A5Q9BY07 1137 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 SMYD2Q9NRG4 433 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 ETAA1Q9NY74 926 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 MARCOQ9UEW3 520 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 GTF2IRD1Q9UHL9 959 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 ARHGAP26Q9UNA1 814 aa10.35□□□□□ -0.75
UBE2D3-208ENST00000394803 A0A0A0MRY4 1105 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 SMIM31A0A1B0GVY4 71 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 SLC22A2O15244 555 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 PLIN3O60664 434 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 POLBP06746 335 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 UQCRBP14927 111 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 IL4RP24394 825 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 NDST1P52848 882 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 PRKAA2P54646 552 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 BTKQ06187 659 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 GOLGA7BQ2TAP0 167 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 SPANXN3Q5MJ09 141 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 RABGAP1LQ5R372 815 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 TEDDM1Q5T9Z0 273 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 N4BP2L1Q5TBK1 243 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 PDPK2PQ6A1A2 396 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 CASC4Q6P4E1 433 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 OLFML1Q6UWY5 402 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 TMEM110Q86TL2 294 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 IFNLR1Q8IU57 520 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 ADGRF2Q8IZF7 708 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 LRRC71Q8N4P6 559 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 STON2Q8WXE9 905 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 SPATA13Q96N96 652 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 TWNKQ96RR1 684 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 GPR20Q99678 358 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 CPNE1Q99829 537 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 MRGBPQ9NV56 204 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 PRPF19Q9UMS4 504 aaKnown RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 ZSWIM8A7E2V4 1837 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 SF3B1O75533 1304 aaKnown RBP eCLIP10.34□□□□□ -0.752e-6■■■■■ 58.5
UBE2D3-208ENST00000394803 GOLGA8QA0A0J9YX86 632 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 GOLGA8OA6NCC3 632 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 ANKRD33BA6NCL7 494 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 GOLGA8NF8WBI6 632 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 SIN3BO75182 1162 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 RTN3O95197 1032 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 APOA4P06727 396 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 C6orf222P0C671 652 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 UBTFL6P0CB48 400 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 FGF3P11487 239 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 ACADSBP45954 432 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 HARS2P49590 506 aaKnown RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 RAB27AP51159 221 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 HIRAP54198 1017 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 ABCE1P61221 599 aaKnown RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 NIPAL4Q0D2K0 466 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 MAP7Q14244 749 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 FRG1Q14331 258 aaKnown RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 R3HDM1Q15032 1099 aaKnown RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 HSF5Q4G112 596 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 LIN52Q52LA3 116 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 PPP6R3Q5H9R7 873 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 MDH1BQ5I0G3 518 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 ZNF484Q5JVG2 852 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 FAXCQ5TGI0 409 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 EEF1DP3Q658K8 133 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 SCARA3Q6AZY7 606 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 PACS1Q6VY07 963 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 ICA1LQ8NDH6 482 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 HTR3CQ8WXA8 447 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 XPNPEP3Q9NQH7 507 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 DPP3Q9NY33 737 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 C6orf203Q9P0P8 240 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 DERAQ9Y315 318 aa10.34□□□□□ -0.75
UBE2D3-208ENST00000394803 EME2A4GXA9 379 aaPredicted RBP10.33□□□□□ -0.76
UBE2D3-208ENST00000394803 KLHL33A6NCF5 533 aa10.33□□□□□ -0.76
UBE2D3-208ENST00000394803 CYB561D2O14569 222 aa10.33□□□□□ -0.76
UBE2D3-208ENST00000394803 MPOP05164 745 aa10.33□□□□□ -0.76
UBE2D3-208ENST00000394803 RALBP11234 206 aa10.33□□□□□ -0.76
UBE2D3-208ENST00000394803 ADSLP30566 484 aaPredicted RBP10.33□□□□□ -0.76
UBE2D3-208ENST00000394803 GP5P40197 560 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms