RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 CREB3O43889 395 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 CLTBP09497 229 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 RFC2P35250 354 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 SKOR1P84550 965 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 IKBKEQ14164 716 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 KCNJ11Q14654 390 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 DDR2Q16832 855 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 ARL13BQ3SXY8 428 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 TNFAIP8L3Q5GJ75 292 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 KDM7AQ6ZMT4 941 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 CROCCP2Q86T23 111 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 NUP93Q8N1F7 819 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 ATAD1Q8NBU5 361 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 C9orf72Q96LT7 481 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 PGLYRP2Q96PD5 576 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 WDCPQ9H6R7 721 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.47■□□□□ 0.07
CCT4-201ENST00000394440 KIAA0100Q14667 2235 aaKnown RBP15.47■□□□□ 0.07
CCT4-201ENST00000394440 HACD1B0YJ81 288 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 TNRC18O15417 2968 aaPredicted RBP15.47■□□□□ 0.07
CCT4-201ENST00000394440 ABHD2P08910 425 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 ZNF135P52742 658 aaPredicted RBP15.47■□□□□ 0.07
CCT4-201ENST00000394440 IFRD2Q12894 506 aaPredicted RBP15.47■□□□□ 0.07
CCT4-201ENST00000394440 CBLBQ13191 982 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 TAS1R1Q7RTX1 841 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 ROPN1BQ9BZX4 212 aaPredicted RBP15.47■□□□□ 0.07
CCT4-201ENST00000394440 TKTL2Q9H0I9 626 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 ROPN1Q9HAT0 212 aaPredicted RBP15.47■□□□□ 0.07
CCT4-201ENST00000394440 SAYSD1Q9NPB0 183 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 TMEM39AQ9NV64 488 aa15.47■□□□□ 0.07
CCT4-201ENST00000394440 PTPRSQ13332 1948 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 NUP205Q92621 2012 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 MYO18AQ92614 2054 aaKnown RBP15.46■□□□□ 0.07
CCT4-201ENST00000394440 ALOX15BO15296 676 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 NR1D1P20393 614 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 MAGEA6P43360 314 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 SMARCB1Q12824 385 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 FASTKD3Q14CZ7 662 aaKnown RBP15.46■□□□□ 0.07
CCT4-201ENST00000394440 SDHAF4Q5VUM1 108 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 BTBD8Q5XKL5 378 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 ANKS3Q6ZW76 656 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 BZW1Q7L1Q6 419 aaKnown RBP15.46■□□□□ 0.07
CCT4-201ENST00000394440 STKLD1Q8NE28 680 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 SPPL2BQ8TCT7 592 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 EPS8L3Q8TE67 593 aaKnown RBP15.46■□□□□ 0.07
CCT4-201ENST00000394440 LRRN4Q8WUT4 740 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 TTPALQ9BTX7 342 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 OXCT2Q9BYC2 517 aaPredicted RBP15.46■□□□□ 0.07
CCT4-201ENST00000394440 CRISPLD1Q9H336 500 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 CENPHQ9H3R5 247 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 OSER1Q9NX31 292 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 ARHGEF38Q9NXL2 777 aa15.46■□□□□ 0.07
CCT4-201ENST00000394440 H7C4K7 107 aa15.46■□□□□ 0.06
CCT4-201ENST00000394440 CHADO15335 359 aa15.46■□□□□ 0.06
CCT4-201ENST00000394440 TCEA3O75764 348 aa15.46■□□□□ 0.06
CCT4-201ENST00000394440 ERCC2P18074 760 aa15.46■□□□□ 0.06
CCT4-201ENST00000394440 USP46P62068 366 aa15.46■□□□□ 0.06
CCT4-201ENST00000394440 BASP1P80723 227 aaKnown RBP15.46■□□□□ 0.06
CCT4-201ENST00000394440 HIF1AQ16665 826 aa15.46■□□□□ 0.06
CCT4-201ENST00000394440 MFSD5Q6N075 450 aa15.46■□□□□ 0.06
CCT4-201ENST00000394440 CENPUQ71F23 418 aa15.46■□□□□ 0.06
CCT4-201ENST00000394440 CASP10Q92851 521 aa15.46■□□□□ 0.06
CCT4-201ENST00000394440 FBXO44Q9H4M3 255 aa15.46■□□□□ 0.06
CCT4-201ENST00000394440 RC3H2Q9HBD1 1191 aaKnown RBP15.46■□□□□ 0.06
CCT4-201ENST00000394440 A0A1W2PQH9 124 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 C5orf60A6NFR6 353 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 EIF3HO15372 352 aaKnown RBP eCLIP15.45■□□□□ 0.06
CCT4-201ENST00000394440 SHOX2O60902 331 aaPredicted RBP15.45■□□□□ 0.06
CCT4-201ENST00000394440 GCATO75600 419 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 UPP2O95045 317 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 CPB1P15086 417 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 VAV1P15498 845 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 ACTN2P35609 894 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 TPI1P60174 286 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 PRKD1Q15139 912 aaPredicted RBP15.45■□□□□ 0.06
CCT4-201ENST00000394440 LRRC26Q2I0M4 334 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 BRMS1LQ5PSV4 323 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 MSANTD2Q6P1R3 559 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 C4orf22Q6V702 233 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 MON1AQ86VX9 555 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 TTC25Q96NG3 672 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 WDR83Q9BRX9 315 aaKnown RBP15.45■□□□□ 0.06
CCT4-201ENST00000394440 VN1R3Q9BXE9 311 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 OSBPL2Q9H1P3 480 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 NOVA2Q9UNW9 492 aaKnown RBP15.45■□□□□ 0.06
CCT4-201ENST00000394440 NEU3Q9UQ49 428 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 KIAA1671Q9BY89 1806 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 RASGRF2O14827 1237 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 AUHQ13825 339 aaKnown RBP15.45■□□□□ 0.06
CCT4-201ENST00000394440 MSS51Q4VC12 460 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 FNBP1LQ5T0N5 605 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 C6orf118Q5T5N4 469 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 RNF19BQ6ZMZ0 732 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 TAB3Q8N5C8 712 aaPredicted RBP15.45■□□□□ 0.06
CCT4-201ENST00000394440 TFB1MQ8WVM0 346 aaKnown RBP15.45■□□□□ 0.06
CCT4-201ENST00000394440 TOP1MTQ969P6 601 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 ZNF689Q96CS4 500 aaPredicted RBP15.45■□□□□ 0.06
CCT4-201ENST00000394440 C11orf49Q9H6J7 331 aa15.45■□□□□ 0.06
CCT4-201ENST00000394440 XPO7Q9UIA9 1087 aaKnown RBP15.45■□□□□ 0.06
CCT4-201ENST00000394440 SHROOM3Q8TF72 1996 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms