RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 OLFM3Q96PB7 478 aa19.71■□□□□ 0.75
CLDND1-203ENST00000394181 TSPYL1Q9H0U9 437 aa19.71■□□□□ 0.75
CLDND1-203ENST00000394181 RRN3Q9NYV6 651 aa19.71■□□□□ 0.75
CLDND1-203ENST00000394181 RCOR3Q9P2K3 495 aaPredicted RBP19.71■□□□□ 0.75
CLDND1-203ENST00000394181 NOVA2Q9UNW9 492 aaKnown RBP19.71■□□□□ 0.75
CLDND1-203ENST00000394181 SHOC2Q9UQ13 582 aa19.71■□□□□ 0.75
CLDND1-203ENST00000394181 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.71■□□□□ 0.75
CLDND1-203ENST00000394181 COL4A4P53420 1690 aaPredicted RBP19.71■□□□□ 0.74
CLDND1-203ENST00000394181 MTMR11A4FU01 709 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 PARNO95453 639 aaKnown RBP19.7■□□□□ 0.74
CLDND1-203ENST00000394181 F9P00740 461 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 VAV1P15498 845 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 CSF2RAP15509 400 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 DEFB103AP81534 67 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 SLC45A4Q5BKX6 768 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 VSTM1Q6UX27 236 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 CCDC13Q8IYE1 715 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 RNF34Q969K3 372 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 TTPALQ9BTX7 342 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 RAB6BQ9NRW1 208 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 ABCC13Q9NSE7 274 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 HMGB1P1B2RPK0 211 aaPredicted RBP19.7■□□□□ 0.74
CLDND1-203ENST00000394181 DCLK1O15075 740 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 ERCC2P18074 760 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 HPDP32754 393 aaPredicted RBP19.7■□□□□ 0.74
CLDND1-203ENST00000394181 LMAN1P49257 510 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 ALDH7A1P49419 539 aaKnown RBP19.7■□□□□ 0.74
CLDND1-203ENST00000394181 RELL1Q8IUW5 271 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 ANKMY2Q8IV38 441 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 DNAJC5GQ8N7S2 189 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 QKIQ96PU8 341 aaKnown RBP eCLIP19.7■□□□□ 0.743e-7■■□□□ 11.5
CLDND1-203ENST00000394181 WDR83Q9BRX9 315 aaKnown RBP19.7■□□□□ 0.74
CLDND1-203ENST00000394181 PRDM5Q9NQX1 630 aaPredicted RBP19.7■□□□□ 0.74
CLDND1-203ENST00000394181 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.7■□□□□ 0.74
CLDND1-203ENST00000394181 GMIPQ9P107 970 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 OR12D3Q9UGF7 316 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 XPO7Q9UIA9 1087 aaKnown RBP19.7■□□□□ 0.74
CLDND1-203ENST00000394181 CDY1Q9Y6F8 540 aa19.7■□□□□ 0.74
CLDND1-203ENST00000394181 PATJQ8NI35 1801 aa19.69■□□□□ 0.74
CLDND1-203ENST00000394181 MICAL3Q7RTP6 2002 aa19.69■□□□□ 0.74
CLDND1-203ENST00000394181 IFI35P80217 286 aaPredicted RBP19.69■□□□□ 0.74
CLDND1-203ENST00000394181 PDIA2Q13087 525 aaKnown RBP19.69■□□□□ 0.74
CLDND1-203ENST00000394181 DUSP4Q13115 394 aa19.69■□□□□ 0.74
CLDND1-203ENST00000394181 GPR17Q13304 367 aa19.69■□□□□ 0.74
CLDND1-203ENST00000394181 CAPN12Q6ZSI9 719 aa19.69■□□□□ 0.74
CLDND1-203ENST00000394181 PCGF5Q86SE9 256 aa19.69■□□□□ 0.74
CLDND1-203ENST00000394181 ZBED8Q8IZ13 594 aa19.69■□□□□ 0.74
CLDND1-203ENST00000394181 ARMC5Q96C12 935 aa19.69■□□□□ 0.74
CLDND1-203ENST00000394181 SEPT5Q99719 369 aaPredicted RBP19.69■□□□□ 0.74
CLDND1-203ENST00000394181 C11orf49Q9H6J7 331 aa19.69■□□□□ 0.74
CLDND1-203ENST00000394181 SCML2Q9UQR0 700 aa19.69■□□□□ 0.74
CLDND1-203ENST00000394181 KIAA0100Q14667 2235 aaKnown RBP19.69■□□□□ 0.74
CLDND1-203ENST00000394181 FOXO6A8MYZ6 492 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 F5H423 210 aaPredicted RBP19.68■□□□□ 0.74
CLDND1-203ENST00000394181 C2CD2LO14523 706 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 TRIM66O15016 1216 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 METTL18O95568 372 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 EFEMP2O95967 443 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 MAGEA11P43364 429 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 MAGOHP61326 146 aaKnown RBP19.68■□□□□ 0.74
CLDND1-203ENST00000394181 XRCC4Q13426 336 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 ARL13BQ3SXY8 428 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 MGAT5BQ3V5L5 792 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 CDKL3Q8IVW4 592 aaPredicted RBP19.68■□□□□ 0.74
CLDND1-203ENST00000394181 NPWQ8N729 165 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 CEP41Q9BYV8 373 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 SIK2Q9H0K1 926 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 COL4A6Q14031 1691 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 IRAK2O43187 625 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 AVILO75366 819 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 LRIG2O94898 1065 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 ACRP10323 421 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 NR1D1P20393 614 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 AIF1P55008 147 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 TPI1P60174 286 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 KCNJ11Q14654 390 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 HIF1AQ16665 826 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 BEND5Q7L4P6 421 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 FOXP3Q9BZS1 431 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 SMOC2Q9H3U7 446 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 CTNNAL1Q9UBT7 734 aa19.68■□□□□ 0.74
CLDND1-203ENST00000394181 RASGRF2O14827 1237 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 ALOX15BO15296 676 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 TBX18O95935 607 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 PAFAH1B3Q15102 231 aaKnown RBP19.67■□□□□ 0.74
CLDND1-203ENST00000394181 AGBL2Q5U5Z8 902 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 FBXO22Q8NEZ5 403 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 GIPC2Q8TF65 315 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 TFB1MQ8WVM0 346 aaKnown RBP19.67■□□□□ 0.74
CLDND1-203ENST00000394181 TOP1MTQ969P6 601 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 TMEM109Q9BVC6 243 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 PRDM12Q9H4Q4 367 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 ETNK1Q9HBU6 452 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 PAK5Q9P286 719 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.67■□□□□ 0.74
CLDND1-203ENST00000394181 CFAP69A5D8W1 941 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 SRGAP2BP0DMP2 458 aa19.67■□□□□ 0.74
CLDND1-203ENST00000394181 HSPA8P11142 646 aaKnown RBP19.67■□□□□ 0.74
CLDND1-203ENST00000394181 ELAVL2Q12926 359 aaKnown RBP19.67■□□□□ 0.74
CLDND1-203ENST00000394181 AUHQ13825 339 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms