RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ZNF234Q14588 700 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 KCTD13Q8WZ19 329 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 PRCCQ92733 491 aaPredicted RBP18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 TATDN2Q93075 761 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 SIPA1Q96FS4 1042 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 GSDMAQ96QA5 445 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 NUP58Q9BVL2 599 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 GOLPH3LQ9H4A5 285 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 CD93Q9NPY3 652 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 SPAARA0A1B0GVQ0 90 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 METTL12A8MUP2 240 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 KCNJ18B7U540 433 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 HYAL3O43820 417 aaPredicted RBP18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 HMBSP08397 361 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 ZNF883P0CG24 379 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 COPAP53621 1224 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 CUL2Q13617 745 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 CBWD6Q4V339 395 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 SGO2Q562F6 1265 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 CBWD3Q5JTY5 395 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 CBWD5Q5RIA9 395 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 ZNF658Q5TYW1 1059 aaPredicted RBP18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 RAB44Q7Z6P3 723 aaPredicted RBP18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 WFIKKN2Q8TEU8 576 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 DDI1Q8WTU0 396 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 ULBP1Q9BZM6 244 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 FBRSQ9HAH7 460 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 LRRC4Q9HBW1 653 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 CNGB3Q9NQW8 809 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 HESX1Q9UBX0 185 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 TSPAN16Q9UKR8 245 aa18.28■□□□□ 0.52
SNRPA1-202ENST00000394082 PMM2O15305 246 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 SETSIPP0DME0 302 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 VDRP11473 427 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 TBXAS1P24557 533 aaPredicted RBP18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 HOXD9P28356 352 aaPredicted RBP18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 PRCPP42785 496 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 LRRC63Q05C16 580 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 GRIK2Q13002 908 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 CAMK2GQ13555 558 aaPredicted RBP18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 MPP7Q5T2T1 576 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 ADGRF1Q5T601 910 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 TMEM215Q68D42 235 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 IL27RAQ6UWB1 636 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 KIAA0907Q7Z7F0 614 aaPredicted RBP18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 GLRX5Q86SX6 157 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 FMNL3Q8IVF7 1028 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 SPATA20Q8TB22 786 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 RNF139Q8WU17 664 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 EEF2KMTQ96G04 330 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 TSG101Q99816 390 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 GPR174Q9BXC1 333 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 ABCC13Q9NSE7 274 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 CLEC4EQ9ULY5 219 aa18.27■□□□□ 0.52
SNRPA1-202ENST00000394082 MEI4A8MW99 385 aa18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 ACADMP11310 421 aa18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 TRIP6Q15654 476 aaKnown RBP18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 GOLGA7BQ2TAP0 167 aa18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 PKDCCQ504Y2 493 aa18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 BSPRYQ5W0U4 402 aa18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 SERPINA13PQ6UXR4 307 aa18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 SMYD4Q8IYR2 804 aaPredicted RBP18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 UBR7Q8N806 425 aa18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 ZNF557Q8N988 423 aaPredicted RBP18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 OR2T3Q8NH03 318 aa18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 IPO9Q96P70 1041 aaKnown RBP18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 CIPCQ9C0C6 399 aa18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 TMEM245Q9H330 911 aa18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 KLK13Q9UKR3 277 aa18.26■□□□□ 0.51
SNRPA1-202ENST00000394082 TULP2O00295 520 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 O00370 1275 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 BCAT2O15382 392 aaPredicted RBP18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 SH3BP5O60239 455 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 PAEPP09466 180 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 PRKCHP24723 683 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 MAOBP27338 520 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 HLA-FP30511 346 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 FAM193AP78312 1265 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 ARID5AQ03989 594 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 ZBTB16Q05516 673 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 ADIGQ0VDE8 80 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 DCAF17Q5H9S7 520 aaPredicted RBP18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 TCERG1LQ5VWI1 586 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 MSANTD2Q6P1R3 559 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 LCLAT1Q6UWP7 414 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 DBX2Q6ZNG2 339 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 NAXDQ8IW45 347 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 FMR1NBQ8N0W7 255 aaPredicted RBP18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 SIX6OS1Q8N1H7 587 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 OR2I1PQ8NGU4 316 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 C1orf216Q8TAB5 229 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 ADAMTS14Q8WXS8 1223 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 IRGQQ8WZA9 623 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 SLC35C1Q96A29 364 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 AZIN2Q96A70 460 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 ERLEC1Q96DZ1 483 aa18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 TMA16Q96EY4 203 aaKnown RBP18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 METTL14Q9HCE5 456 aaKnown RBP18.25■□□□□ 0.51
SNRPA1-202ENST00000394082 OSGEPQ9NPF4 335 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms