RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SLC25A52Q3SY17 297 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 MPPE1Q53F39 396 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 NUDT18Q6ZVK8 323 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 MON1BQ7L1V2 547 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 VPS36Q86VN1 386 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 C12orf40Q86WS4 652 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 ETFBKMTQ8IXQ9 262 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 ATP6V0D2Q8N8Y2 350 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 CCDC26Q8TAB7 109 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 DDI1Q8WTU0 396 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 TMA16Q96EY4 203 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 VCPIP1Q96JH7 1222 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 NPY6RQ99463 290 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 ARHGEF4Q9NR80 690 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 METTL5Q9NRN9 209 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 SPATA6Q9NWH7 488 aaPredicted RBP19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 DDX3XO00571 662 aaKnown RBP eCLIP19.73■□□□□ 0.751e-16■■■□□ 15.4
PDLIM7-204ENST00000393546 AP5Z1O43299 807 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 TSPAN3O60637 253 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 TULP3O75386 442 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 MOCS2O96007 188 aaPredicted RBP19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 KRT3P12035 628 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 ABCB4P21439 1286 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 GRIA2P42262 883 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 SULT1E1P49888 294 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 GSCP56915 257 aaPredicted RBP19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 FYB2Q5VWT5 728 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 HGSNATQ68CP4 663 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 SND1Q7KZF4 910 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 C1orf210Q8IVY1 113 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 MCOLN2Q8IZK6 566 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 OR8K1Q8NGG5 319 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 OLIG1Q8TAK6 271 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 BHMTQ93088 406 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 NT5C3BQ969T7 300 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 BTN2A3PQ96KV6 586 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 SELENOOQ9BVL4 669 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 IRX2Q9BZI1 471 aaPredicted RBP19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 DNAJC17Q9NVM6 304 aaKnown RBP19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 TAS2R14Q9NYV8 317 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 PLK2Q9NYY3 685 aa19.73■□□□□ 0.75
PDLIM7-204ENST00000393546 A0A0A0MRY4 1105 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 GOLGA6L7A0A1B0GV03 622 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 SIGLEC16A6NMB1 481 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 CACNG3O60359 315 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 RTN2O75298 545 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 KAT7O95251 611 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 PENKP01210 267 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 FLT3P36888 993 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 DEUP1Q05D60 604 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 MTA1Q13330 715 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 PPP2R5DQ14738 602 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 GRAMD4Q6IC98 578 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 DRC7Q8IY82 874 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 C3orf20Q8ND61 904 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 PGAP3Q96FM1 320 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 TBCBQ99426 244 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 ZNHIT6Q9NWK9 470 aaKnown RBP19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 PAXBP1Q9Y5B6 917 aa19.72■□□□□ 0.75
PDLIM7-204ENST00000393546 ANKRD62A6NC57 917 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 TBC1D3BA6NDS4 549 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 KCNU1A8MYU2 1149 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 LAMTOR5O43504 91 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 ATG13O75143 517 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 FTLP02792 175 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 PDGFRAP16234 1089 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 HNRNPH3P31942 346 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 TNFRSF4P43489 277 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 KDSRQ06136 332 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 MTAPQ13126 283 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 FAM133BQ5BKY9 247 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 DNAJC24Q6P3W2 148 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 MAMSTRQ6ZN01 415 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 SPEM1Q8N4L4 309 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 EMC1Q8N766 993 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 RXFP2Q8WXD0 754 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 WDCPQ9H6R7 721 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 ADAMTS1Q9UHI8 967 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 FBXO10Q9UK96 956 aa19.71■□□□□ 0.75
PDLIM7-204ENST00000393546 K7EQS6 105 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 GFRA2O00451 464 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 RNF40O75150 1001 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 SDC4P31431 198 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 DGKGP49619 791 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 GAS6Q14393 721 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 BRMS1LQ5PSV4 323 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 PIK3R6Q5UE93 754 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 NADSYN1Q6IA69 706 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 TRNP1Q6NT89 227 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 RFWD3Q6PCD5 774 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 Q6ZS52 159 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 TMC6Q7Z403 805 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 PHTF2Q8N3S3 785 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 PRSS33Q8NF86 280 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 JOSD2Q8TAC2 188 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 EZH1Q92800 747 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 CFAP57Q96MR6 1250 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 SLC2A11Q9BYW1 496 aa19.7■□□□□ 0.74
PDLIM7-204ENST00000393546 IRF2BPLQ9H1B7 796 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms