RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 TMEM8BA6NDV4 472 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 ZBED1O96006 694 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 TBXAS1P24557 533 aaPredicted RBP12.92□□□□□ -0.34
CTSC-202ENST00000393301 SLC8A3P57103 927 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 YWHAGP61981 247 aaKnown RBP eCLIP12.92□□□□□ -0.34
CTSC-202ENST00000393301 YWHAEP62258 255 aaKnown RBP12.92□□□□□ -0.34
CTSC-202ENST00000393301 BST2Q10589 180 aaKnown RBP12.92□□□□□ -0.34
CTSC-202ENST00000393301 SLC14A1Q13336 389 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 HNRNPDQ14103 355 aaKnown RBP12.92□□□□□ -0.34
CTSC-202ENST00000393301 GEN1Q17RS7 908 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 ZNF394Q53GI3 561 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 MSANTD2Q6P1R3 559 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 ANKS1BQ7Z6G8 1248 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 KIAA0907Q7Z7F0 614 aaPredicted RBP12.92□□□□□ -0.34
CTSC-202ENST00000393301 FAM114A1Q8IWE2 563 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 PGBD3Q8N328 593 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.92□□□□□ -0.34
CTSC-202ENST00000393301 KDF1Q8NAX2 398 aaPredicted RBP12.92□□□□□ -0.34
CTSC-202ENST00000393301 CADM4Q8NFZ8 388 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 TATDN2Q93075 761 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 JAKMIP2Q96AA8 810 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 NAT10Q9H0A0 1025 aaKnown RBP12.92□□□□□ -0.34
CTSC-202ENST00000393301 PCED1AQ9H1Q7 454 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 CACNA2D2Q9NY47 1150 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 WSB2Q9NYS7 404 aaPredicted RBP12.92□□□□□ -0.34
CTSC-202ENST00000393301 MARCH2Q9P0N8 246 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 SUSD2Q9UGT4 822 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 RASAL2Q9UJF2 1139 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 TSPAN16Q9UKR8 245 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 STON1Q9Y6Q2 735 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 NUMA1Q14980 2115 aa12.92□□□□□ -0.34
CTSC-202ENST00000393301 GTPBP10A4D1E9 387 aaKnown RBP12.91□□□□□ -0.34
CTSC-202ENST00000393301 FAM221BA6H8Z2 402 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 TRIM49BA6NDI0 452 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 O00370 1275 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 ZBTB24O43167 697 aaPredicted RBP12.91□□□□□ -0.34
CTSC-202ENST00000393301 TIMM44O43615 452 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 PAEPP09466 180 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 SETSIPP0DME0 302 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 VDRP11473 427 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 EEF1GP26641 437 aaKnown RBP12.91□□□□□ -0.34
CTSC-202ENST00000393301 IL12RB1P42701 662 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 TKTL1P51854 596 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 EFEMP1Q12805 493 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 SGO2Q562F6 1265 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 CDKAL1Q5VV42 579 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 CAVIN1Q6NZI2 390 aaKnown RBP12.91□□□□□ -0.34
CTSC-202ENST00000393301 ARMCX6Q7L4S7 300 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 IRF2BP1Q8IU81 584 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 UCMAQ8WVF2 138 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 GATA6Q92908 595 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 ULBP1Q9BZM6 244 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 ZDHHC5Q9C0B5 715 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 SLC32A1Q9H598 525 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 MMRN2Q9H8L6 949 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 CNGB3Q9NQW8 809 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 ITM2CQ9NQX7 267 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 ELOVL2Q9NXB9 296 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 LAMA5O15230 3695 aa12.91□□□□□ -0.34
CTSC-202ENST00000393301 IGLV3-27P01718 113 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 CYBBP04839 570 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 NCAM1P13591 858 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 HOXD9P28356 352 aaPredicted RBP12.9□□□□□ -0.34
CTSC-202ENST00000393301 CD6P30203 668 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 WASP42768 502 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 RPL34P49207 117 aaKnown RBP12.9□□□□□ -0.34
CTSC-202ENST00000393301 COPAP53621 1224 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 GFPT1Q06210 699 aaPredicted RBP12.9□□□□□ -0.34
CTSC-202ENST00000393301 TYRO3Q06418 890 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 STARD3Q14849 445 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 NFKBIBQ15653 356 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 FUT11Q495W5 492 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 MPP7Q5T2T1 576 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 LCLAT1Q6UWP7 414 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 WFIKKN2Q8TEU8 576 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 IRGQQ8WZA9 623 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 EEF2KMTQ96G04 330 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 HSPA12BQ96MM6 686 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 SRRTQ9BXP5 876 aaKnown RBP12.9□□□□□ -0.34
CTSC-202ENST00000393301 ADAM33Q9BZ11 813 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 MKRN2Q9H000 416 aaKnown RBP12.9□□□□□ -0.34
CTSC-202ENST00000393301 FBRSQ9HAH7 460 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 PLK2Q9NYY3 685 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 CYP8B1Q9UNU6 501 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 CTNND2Q9UQB3 1225 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 NEUROG3Q9Y4Z2 214 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 ACACAQ13085 2346 aa12.9□□□□□ -0.34
CTSC-202ENST00000393301 ATXN2Q99700 1313 aaKnown RBP12.89□□□□□ -0.35
CTSC-202ENST00000393301 SLC12A8A0AV02 714 aa12.89□□□□□ -0.35
CTSC-202ENST00000393301 WASH3PC4AMC7 463 aa12.89□□□□□ -0.35
CTSC-202ENST00000393301 H0Y626 953 aa12.89□□□□□ -0.35
CTSC-202ENST00000393301 TULP2O00295 520 aa12.89□□□□□ -0.35
CTSC-202ENST00000393301 OPHN1O60890 802 aa12.89□□□□□ -0.35
CTSC-202ENST00000393301 TRIM16O95361 564 aa12.89□□□□□ -0.35
CTSC-202ENST00000393301 SYPP08247 313 aa12.89□□□□□ -0.35
CTSC-202ENST00000393301 CD59P13987 128 aa12.89□□□□□ -0.35
CTSC-202ENST00000393301 KCNA4P22459 653 aa12.89□□□□□ -0.35
CTSC-202ENST00000393301 OXTRP30559 389 aa12.89□□□□□ -0.35
CTSC-202ENST00000393301 DAOAP59103 153 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms