RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 SLC35F5Q8WV83 523 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 KREMEN1Q96MU8 473 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 GTPBP2Q9BX10 602 aaKnown RBP17.31■□□□□ 0.36
PTPRK-208ENST00000392449 OLA1Q9NTK5 396 aaKnown RBP17.31■□□□□ 0.36
PTPRK-208ENST00000392449 CKAP5Q14008 2032 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 GFRA2O00451 464 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 ZNF217O75362 1048 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 PAEPP09466 180 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 MAOBP27338 520 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 HARS2P49590 506 aaKnown RBP17.31■□□□□ 0.36
PTPRK-208ENST00000392449 ZNF252P-AS1Q0IIN9 211 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 SPDYCQ5MJ68 293 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 GTPBP4Q9BZE4 634 aaKnown RBP17.31■□□□□ 0.36
PTPRK-208ENST00000392449 MIS12Q9H081 205 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 PRDM16Q9HAZ2 1276 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 CNGB3Q9NQW8 809 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 ELOVL2Q9NXB9 296 aa17.31■□□□□ 0.36
PTPRK-208ENST00000392449 MUC22E2RYF6 1773 aaPredicted RBP17.3■□□□□ 0.36
PTPRK-208ENST00000392449 CEP295Q9C0D2 2601 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 USP24Q9UPU5 2620 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 GOLGA6L7A0A1B0GV03 622 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 KCNJ18B7U540 433 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 PMM2O15305 246 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 TOP3BO95985 862 aaKnown RBP17.3■□□□□ 0.36
PTPRK-208ENST00000392449 HLA-EP13747 358 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 SPINK2P20155 84 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 HLA-FP30511 346 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 KCNH2Q12809 1159 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 LMAN2Q12907 356 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 ENPP2Q13822 863 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 STARD3Q14849 445 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 RFWD3Q6PCD5 774 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 TRIM59Q8IWR1 403 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 ELOA2Q8IYF1 753 aaPredicted RBP17.3■□□□□ 0.36
PTPRK-208ENST00000392449 ZNF366Q8N895 744 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 WFDC5Q8TCV5 224 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 CYB5D2Q8WUJ1 264 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 ABCC13Q9NSE7 274 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 KIAA1257Q9ULG3 409 aa17.3■□□□□ 0.36
PTPRK-208ENST00000392449 HBS1LQ9Y450 684 aaKnown RBP17.3■□□□□ 0.36
PTPRK-208ENST00000392449 SPEGQ15772 3267 aa17.29■□□□□ 0.36
PTPRK-208ENST00000392449 ASPMQ8IZT6 3477 aa17.29■□□□□ 0.36
PTPRK-208ENST00000392449 NDUFS2O75306 463 aa17.29■□□□□ 0.36
PTPRK-208ENST00000392449 ZNF132P52740 706 aa17.29■□□□□ 0.36
PTPRK-208ENST00000392449 CNGA2Q16280 664 aa17.29■□□□□ 0.36
PTPRK-208ENST00000392449 DUOXA1Q1HG43 343 aa17.29■□□□□ 0.36
PTPRK-208ENST00000392449 MPPE1Q53F39 396 aa17.29■□□□□ 0.36
PTPRK-208ENST00000392449 EHBP1Q8NDI1 1231 aa17.29■□□□□ 0.36
PTPRK-208ENST00000392449 SRRTQ9BXP5 876 aaKnown RBP17.29■□□□□ 0.36
PTPRK-208ENST00000392449 INTS2Q9H0H0 1204 aaKnown RBP17.29■□□□□ 0.36
PTPRK-208ENST00000392449 CAPN10Q9HC96 672 aa17.29■□□□□ 0.36
PTPRK-208ENST00000392449 ACP6Q9NPH0 428 aa17.29■□□□□ 0.36
PTPRK-208ENST00000392449 ZFHX4Q86UP3 3567 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 LTFP02788 710 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 EPHX1P07099 455 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 NCAM1P13591 858 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 SLC6A4P31645 630 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 COPAP53621 1224 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 APBA1Q02410 837 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 FOXC1Q12948 553 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 PAK1Q13153 545 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 ST3GAL2Q16842 350 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 ADGRF1Q5T601 910 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 MSANTD2Q6P1R3 559 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 SERPINA13PQ6UXR4 307 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 TMPRSS6Q8IU80 811 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 RGL4Q8IZJ4 473 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 SCML4Q8N228 414 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 UCMAQ8WVF2 138 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 MYEOVQ96EZ4 313 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 TOE1Q96GM8 510 aaKnown RBP17.28■□□□□ 0.36
PTPRK-208ENST00000392449 ABCB8Q9NUT2 735 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 USP36Q9P275 1121 aaKnown RBP17.28■□□□□ 0.36
PTPRK-208ENST00000392449 STOML2Q9UJZ1 356 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 SLC6A14Q9UN76 642 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 CACNA1EQ15878 2313 aa17.28■□□□□ 0.36
PTPRK-208ENST00000392449 BICDL2A1A5D9 508 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 SYNCRIPO60506 623 aaKnown RBP17.27■□□□□ 0.36
PTPRK-208ENST00000392449 IGLV3-27P01718 113 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 FYNP06241 537 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 SERPINF2P08697 491 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 CD6P30203 668 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 HOXD12P35452 270 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 PPP1R2P41236 205 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 TPMTP51580 245 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 SHC2P98077 582 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 GCNT1Q02742 428 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 GFPT1Q06210 699 aaPredicted RBP17.27■□□□□ 0.36
PTPRK-208ENST00000392449 EIF4HQ15056 248 aaKnown RBP17.27■□□□□ 0.36
PTPRK-208ENST00000392449 FAM133BQ5BKY9 247 aaKnown RBP17.27■□□□□ 0.36
PTPRK-208ENST00000392449 DENND1BQ6P3S1 775 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 GJB7Q6PEY0 223 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 ADAM32Q8TC27 787 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 TMA16Q96EY4 203 aaKnown RBP17.27■□□□□ 0.36
PTPRK-208ENST00000392449 ZNF419Q96HQ0 510 aaPredicted RBP17.27■□□□□ 0.36
PTPRK-208ENST00000392449 GPR174Q9BXC1 333 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 SLC2A11Q9BYW1 496 aa17.27■□□□□ 0.36
PTPRK-208ENST00000392449 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.27■□□□□ 0.36
PTPRK-208ENST00000392449 WDFY3Q8IZQ1 3526 aa17.27■□□□□ 0.35
PTPRK-208ENST00000392449 NUMA1Q14980 2115 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms