RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 KRT27Q7Z3Y8 459 aa18.58■□□□□ 0.56
ERCC2-201ENST00000391941 PIWIL2Q8TC59 973 aaKnown RBP18.58■□□□□ 0.56
ERCC2-201ENST00000391941 TEPSINQ96N21 525 aa18.58■□□□□ 0.56
ERCC2-201ENST00000391941 LGMNQ99538 433 aa18.58■□□□□ 0.56
ERCC2-201ENST00000391941 SNRNP25Q9BV90 132 aaKnown RBP18.58■□□□□ 0.56
ERCC2-201ENST00000391941 QTRT2Q9H974 415 aaKnown RBP18.58■□□□□ 0.56
ERCC2-201ENST00000391941 PNPLA8Q9NP80 782 aa18.58■□□□□ 0.56
ERCC2-201ENST00000391941 COX16Q9P0S2 106 aa18.58■□□□□ 0.56
ERCC2-201ENST00000391941 KRT38O76015 456 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 GPD1P21695 349 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 UBA1P22314 1058 aaKnown RBP18.57■□□□□ 0.56
ERCC2-201ENST00000391941 PRKCHP24723 683 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 MLH1P40692 756 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 CLCN3P51790 818 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 AP3M2P53677 418 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 IGBP1P78318 339 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 MED21Q13503 144 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 GSTA3Q16772 222 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 MAPK15Q8TD08 544 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 NDRG1Q92597 394 aaKnown RBP18.57■□□□□ 0.56
ERCC2-201ENST00000391941 PPP2R3CQ969Q6 453 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 NR1H4Q96RI1 486 aaPredicted RBP18.57■□□□□ 0.56
ERCC2-201ENST00000391941 MRPL4Q9BYD3 311 aaKnown RBP18.57■□□□□ 0.56
ERCC2-201ENST00000391941 KLC2Q9H0B6 622 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 CAB39LQ9H9S4 337 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 APOBEC2Q9Y235 224 aaKnown RBP18.57■□□□□ 0.56
ERCC2-201ENST00000391941 INPP5FQ9Y2H2 1132 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.57■□□□□ 0.56
ERCC2-201ENST00000391941 GOLGA8TH3BQL2 631 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 AIM2O14862 343 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 OGTO15294 1046 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 ITGAXP20702 1163 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 PTAR1Q7Z6K3 402 aaPredicted RBP18.57■□□□□ 0.56
ERCC2-201ENST00000391941 TRIM42Q8IWZ5 723 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 SORT1Q99523 831 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 LHX5Q9H2C1 402 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 TMEM134Q9H6X4 195 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 PCDH18Q9HCL0 1135 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 THAP1Q9NVV9 213 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 SEPT10Q9P0V9 454 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 PAK5Q9P286 719 aa18.57■□□□□ 0.56
ERCC2-201ENST00000391941 APOL1O14791 398 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 TNNC2P02585 160 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 ZNF143P52747 638 aaPredicted RBP18.56■□□□□ 0.56
ERCC2-201ENST00000391941 CXCL9Q07325 125 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 PCLAFQ15004 111 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.56■□□□□ 0.56
ERCC2-201ENST00000391941 PDPK2PQ6A1A2 396 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 JADE1Q6IE81 842 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 ARHGAP22Q7Z5H3 698 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 PLD6Q8N2A8 252 aaKnown RBP18.56■□□□□ 0.56
ERCC2-201ENST00000391941 FAM156AQ8NDB6 213 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 USP13Q92995 863 aaPredicted RBP18.56■□□□□ 0.56
ERCC2-201ENST00000391941 CPB2Q96IY4 423 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 CDHR1Q96JP9 859 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 DHX35Q9H5Z1 703 aaKnown RBP18.56■□□□□ 0.56
ERCC2-201ENST00000391941 WDR55Q9H6Y2 383 aaPredicted RBP18.56■□□□□ 0.56
ERCC2-201ENST00000391941 ASNSD1Q9NWL6 643 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 C2CD4BA6NLJ0 364 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 STX16-NPEPL1H3BU86 382 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 PRKCGP05129 697 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 ARSAP15289 507 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 TCN1P20061 433 aaPredicted RBP18.56■□□□□ 0.56
ERCC2-201ENST00000391941 STAT5BP51692 787 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 PKNOX1P55347 436 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 TBL3Q12788 808 aaKnown RBP18.56■□□□□ 0.56
ERCC2-201ENST00000391941 PDK3Q15120 406 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 TLR1Q15399 786 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 SLC9B1Q4ZJI4 515 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 WDR75Q8IWA0 830 aaKnown RBP18.56■□□□□ 0.56
ERCC2-201ENST00000391941 ZNF180Q9UJW8 692 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 HEMK1Q9Y5R4 338 aaPredicted RBP18.56■□□□□ 0.56
ERCC2-201ENST00000391941 MRPL42Q9Y6G3 142 aaKnown RBP18.56■□□□□ 0.56
ERCC2-201ENST00000391941 MGAMO43451 1857 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 CFLARO15519 480 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 SAT1P21673 171 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 MGAT1P26572 445 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 PMF1Q6P1K2 205 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 IYDQ6PHW0 289 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 NAPRTQ6XQN6 538 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 SPATA24Q86W54 205 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 ZNF781Q8N8C0 355 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 GSDMBQ8TAX9 411 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 PPP1R13LQ8WUF5 828 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 EBNA1BP2Q99848 306 aaKnown RBP18.56■□□□□ 0.56
ERCC2-201ENST00000391941 UBAP1Q9NZ09 502 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 TSPAN16Q9UKR8 245 aa18.56■□□□□ 0.56
ERCC2-201ENST00000391941 TRIP11Q15643 1979 aa18.55■□□□□ 0.56
ERCC2-201ENST00000391941 LACTBL1A8MY62 500 aa18.55■□□□□ 0.56
ERCC2-201ENST00000391941 GPR25O00155 361 aa18.55■□□□□ 0.56
ERCC2-201ENST00000391941 CRHR1P34998 444 aa18.55■□□□□ 0.56
ERCC2-201ENST00000391941 NDST1P52848 882 aa18.55■□□□□ 0.56
ERCC2-201ENST00000391941 TTLL12Q14166 644 aaPredicted RBP18.55■□□□□ 0.56
ERCC2-201ENST00000391941 PPP2R5DQ14738 602 aa18.55■□□□□ 0.56
ERCC2-201ENST00000391941 LGSNQ5TDP6 509 aa18.55■□□□□ 0.56
ERCC2-201ENST00000391941 TMCO4Q5TGY1 634 aa18.55■□□□□ 0.56
ERCC2-201ENST00000391941 WDR78Q5VTH9 848 aa18.55■□□□□ 0.56
ERCC2-201ENST00000391941 KCNT2Q6UVM3 1135 aa18.55■□□□□ 0.56
ERCC2-201ENST00000391941 ZPBP2Q6X784 338 aa18.55■□□□□ 0.56
ERCC2-201ENST00000391941 GALNT4Q8N4A0 578 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms