RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 SLC2A3P11169 496 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 GBP1P32455 592 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 TIE1P35590 1138 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 KLK7P49862 253 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 SLC6A3Q01959 620 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 EIF4HQ15056 248 aaKnown RBP13.18□□□□□ -0.3
GGPS1-203ENST00000391855 MPP7Q5T2T1 576 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 TAF3Q5VWG9 929 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 OLFML1Q6UWY5 402 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 FAM183BPQ6ZVS7 135 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 CACNA2D4Q7Z3S7 1137 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 ANKS1BQ7Z6G8 1248 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 NOP9Q86U38 636 aaKnown RBP13.18□□□□□ -0.3
GGPS1-203ENST00000391855 ERICH1Q86X53 443 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 ZNF513Q8N8E2 541 aaPredicted RBP13.18□□□□□ -0.3
GGPS1-203ENST00000391855 IL17RCQ8NAC3 791 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 TXNDC5Q8NBS9 432 aaKnown RBP13.18□□□□□ -0.3
GGPS1-203ENST00000391855 UCMAQ8WVF2 138 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 C18orf8Q96DM3 657 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 FCRL2Q96LA5 508 aaPredicted RBP13.18□□□□□ -0.3
GGPS1-203ENST00000391855 POLMQ9NP87 494 aaPredicted RBP13.18□□□□□ -0.3
GGPS1-203ENST00000391855 C2orf42Q9NWW7 574 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 NOCTQ9UK39 431 aaKnown RBP13.18□□□□□ -0.3
GGPS1-203ENST00000391855 MYO6Q9UM54 1294 aa13.18□□□□□ -0.3
GGPS1-203ENST00000391855 SMG5Q9UPR3 1016 aaKnown RBP13.18□□□□□ -0.3
GGPS1-203ENST00000391855 PIEZO1Q92508 2521 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 AXIN1O15169 862 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 EPHB6O15197 1021 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 KLF8O95600 359 aaPredicted RBP13.17□□□□□ -0.3
GGPS1-203ENST00000391855 ERBB2P04626 1255 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 CISD3P0C7P0 127 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
GGPS1-203ENST00000391855 NOS2P35228 1153 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 GABRB2P47870 512 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 NOMO3P69849 1222 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 MESP2Q0VG99 397 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 IQCB1Q15051 598 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 CRY1Q16526 586 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 DCAF6Q58WW2 860 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 SYPL2Q5VXT5 272 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 HEATR6Q6AI08 1181 aaKnown RBP13.17□□□□□ -0.3
GGPS1-203ENST00000391855 SDE2Q6IQ49 451 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 C11orf74Q86VG3 221 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 DEFB106AQ8N104 65 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 ALLCQ8N6M5 410 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 SUMF1Q8NBK3 374 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 HJURPQ8NCD3 748 aaPredicted RBP13.17□□□□□ -0.3
GGPS1-203ENST00000391855 WFIKKN2Q8TEU8 576 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 RUBCNQ92622 972 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 TMA16Q96EY4 203 aaKnown RBP13.17□□□□□ -0.3
GGPS1-203ENST00000391855 HHIPQ96QV1 700 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 FAM204AQ9H8W3 233 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
GGPS1-203ENST00000391855 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.17□□□□□ -0.3
GGPS1-203ENST00000391855 PLK2Q9NYY3 685 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 TJP2Q9UDY2 1190 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 SLC12A6Q9UHW9 1150 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 STAP1Q9ULZ2 295 aa13.17□□□□□ -0.3
GGPS1-203ENST00000391855 WDFY4Q6ZS81 3184 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 A0A1W2PQC6 194 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 MMEP08473 750 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 HNRNPLP14866 589 aaKnown RBP eCLIP13.16□□□□□ -0.33e-6■□□□□ 10.6
GGPS1-203ENST00000391855 HOXD9P28356 352 aaPredicted RBP13.16□□□□□ -0.3
GGPS1-203ENST00000391855 NTSR1P30989 418 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 DMWDQ09019 674 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 SIM2Q14190 667 aaPredicted RBP13.16□□□□□ -0.3
GGPS1-203ENST00000391855 RNF43Q68DV7 783 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 RASSF3Q86WH2 238 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 CCDC33Q8N5R6 958 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 ATP6V0D2Q8N8Y2 350 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 GAB3Q8WWW8 586 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 BHMTQ93088 406 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 PIWIL1Q96J94 861 aaKnown RBP13.16□□□□□ -0.3
GGPS1-203ENST00000391855 BTN2A3PQ96KV6 586 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 GMEB2Q9UKD1 530 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 PAXBP1Q9Y5B6 917 aa13.16□□□□□ -0.3
GGPS1-203ENST00000391855 A0A1B0GTH6 734 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 GOLGA6L19H0YKK7 550 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 SGK1O00141 431 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 TIMM44O43615 452 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 CYP1A1P04798 512 aaPredicted RBP13.15□□□□□ -0.3
GGPS1-203ENST00000391855 HOXB2P14652 356 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 FERP16591 822 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 CCR1P32246 355 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 MATKP42679 507 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 FMO1Q01740 532 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 EIF4EBP2Q13542 120 aaPredicted RBP13.15□□□□□ -0.3
GGPS1-203ENST00000391855 TAF5Q15542 800 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 FAM133BQ5BKY9 247 aaKnown RBP13.15□□□□□ -0.3
GGPS1-203ENST00000391855 FAM102AQ5T9C2 384 aaPredicted RBP13.15□□□□□ -0.3
GGPS1-203ENST00000391855 PIK3R6Q5UE93 754 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 NAA35Q5VZE5 725 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 LAIR1Q6GTX8 287 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 CEP68Q76N32 757 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 CCDC117Q8IWD4 279 aaPredicted RBP13.15□□□□□ -0.3
GGPS1-203ENST00000391855 CHPFQ8IZ52 775 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.15□□□□□ -0.3
GGPS1-203ENST00000391855 ADAM32Q8TC27 787 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 CBX8Q9HC52 389 aa13.15□□□□□ -0.3
GGPS1-203ENST00000391855 DDIT4Q9NX09 232 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms