RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 OVOS2A0A0G2JMS6 1433 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 LTFP02788 710 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 MAPK1P28482 360 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 PRKAA1Q13131 559 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 MYBPC2Q14324 1141 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 LPIN1Q14693 890 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 SEZ6Q53EL9 994 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 CLEC10AQ8IUN9 316 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 SLC22A9Q8IVM8 553 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 BORCS5Q969J3 196 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 VMP1Q96GC9 406 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 GPR63Q9BZJ6 419 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 PCDH12Q9NPG4 1184 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 TBX3O15119 743 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 RRM1P23921 792 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 SNRPFP62306 86 aaKnown RBP16.55■□□□□ 0.24
SHANK1-204ENST00000391814 SPIRE1Q08AE8 756 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 GRIK3Q13003 919 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 CYP4Z2PQ8N1L4 340 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 TBC1D19Q8N5T2 526 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 PPP1R14AQ96A00 147 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 KIFC1Q9BW19 673 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 GPAMQ9HCL2 828 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 TBX20Q9UMR3 447 aa16.55■□□□□ 0.24
SHANK1-204ENST00000391814 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 IREB2P48200 963 aaKnown RBP16.54■□□□□ 0.24
SHANK1-204ENST00000391814 ZNF543Q08ER8 600 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 C16orf46Q6P387 395 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 CASP12Q6UXS9 341 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 COLGALT1Q8NBJ5 622 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 NAT14Q8WUY8 206 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 PCDH9Q9HC56 1237 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 GALNT8Q9NY28 637 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 PROSCO94903 275 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 PCNAP12004 261 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 IKBIPQ70UQ0 350 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 KRT77Q7Z794 578 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 NT5DC3Q86UY8 548 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 ELMO3Q96BJ8 720 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 NPM3O75607 178 aaKnown RBP16.54■□□□□ 0.24
SHANK1-204ENST00000391814 ABCB1P08183 1280 aaPredicted RBP16.54■□□□□ 0.24
SHANK1-204ENST00000391814 ATAD3BQ5T9A4 648 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 HTRA1Q92743 480 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 ETS1P14921 441 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 NUMBP49757 651 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 EGFLAMQ63HQ2 1017 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 PIDD1Q9HB75 910 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.54■□□□□ 0.24
SHANK1-204ENST00000391814 AP4B1Q9Y6B7 739 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 SSNA1O43805 119 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 IL18RAPO95256 599 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 COX4I1P13073 169 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 MPP3Q13368 585 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 PDK2Q15119 407 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 KLHL32Q96NJ5 620 aa16.54■□□□□ 0.24
SHANK1-204ENST00000391814 TPP1O14773 563 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 KATNA1O75449 491 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 SLC26A3P40879 764 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 SPIDRQ14159 915 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 SNX17Q15036 470 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 IZUMO1Q8IYV9 350 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 B3GALNT2Q8NCR0 500 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 ACOX2Q99424 681 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 PIN4Q9Y237 131 aaKnown RBP16.53■□□□□ 0.24
SHANK1-204ENST00000391814 DGAT1O75907 488 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 VIL1P09327 827 aaKnown RBP16.53■□□□□ 0.24
SHANK1-204ENST00000391814 AMHR2Q16671 573 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 ZDHHC13Q8IUH4 622 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 CELF1Q92879 486 aaKnown RBP16.53■□□□□ 0.24
SHANK1-204ENST00000391814 COX4I2Q96KJ9 171 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 VANGL2Q9ULK5 521 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 M0QYT0 321 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 MED24O75448 989 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 UQCRBP14927 111 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 LGALS3BPQ08380 585 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 ITGB3P05106 788 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 RBP1P09455 135 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 CYP11B2P19099 503 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 RPA1P27694 616 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 ADSSP30520 456 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 GRIA3P42263 894 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 AUHQ13825 339 aaKnown RBP16.53■□□□□ 0.24
SHANK1-204ENST00000391814 ARHGEF6Q15052 776 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 TSC22D1Q15714 1073 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 CARTPTQ16568 116 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 ULK2Q8IYT8 1036 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 FAR1Q8WVX9 515 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 TIMMDC1Q9NPL8 285 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 ACOT9Q9Y305 439 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 ARAP3Q8WWN8 1544 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 ALOX5P09917 674 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 SP100P23497 879 aaPredicted RBP16.53■□□□□ 0.24
SHANK1-204ENST00000391814 TTLL4Q14679 1199 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 SAMD4BQ5PRF9 694 aaKnown RBP16.53■□□□□ 0.24
SHANK1-204ENST00000391814 CES3Q6UWW8 571 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 EMC1Q8N766 993 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 SPPL2AQ8TCT8 520 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 NSUN4Q96CB9 384 aaKnown RBP16.53■□□□□ 0.24
SHANK1-204ENST00000391814 TEX13BQ9BXU2 312 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 CEP41Q9BYV8 373 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms