RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 SEC23BQ15437 767 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 WASHC2DQ5SRD0 308 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 TTC39AQ5SRH9 613 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 C6orf10Q5SRN2 563 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 SPATA31A5Q5VU36 1347 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 CAPRIN2Q6IMN6 1127 aaKnown RBP1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 SLC39A5Q6ZMH5 540 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 SPATA31A7Q8IWB4 1347 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 FAM177A1Q8N128 213 aaPredicted RBP1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 MYO1HQ8N1T3 1032 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 CCDC33Q8N5R6 958 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 IQCF1Q8N6M8 205 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 METTL25Q8N6Q8 603 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 OR52L2PQ8NGH6 319 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 SUN3Q8TAQ9 357 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 CELF1Q92879 486 aaKnown RBP1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 P2RY11Q96G91 374 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 GPATCH3Q96I76 525 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 ZNF845Q96IR2 970 aaPredicted RBP1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 FAR2Q96K12 515 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 SNX27Q96L92 541 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 ABHD14AQ9BUJ0 271 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 TM2D2Q9BX73 214 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 SLCO5A1Q9H2Y9 848 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 PRDM16Q9HAZ2 1276 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 RXFP3Q9NSD7 469 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 TXLNGQ9NUQ3 528 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 FBXO28Q9NVF7 368 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 PLK2Q9NYY3 685 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 COL20A1Q9P218 1284 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 VPS51Q9UID3 782 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 ASAP1Q9ULH1 1129 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 PROCRQ9UNN8 238 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 COG5Q9UP83 839 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 CEP83Q9Y592 693 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 PCDHB7Q9Y5E2 793 aa1.53□□□□□ -2.16
SNORD28B-201ENST00000390993 TTBK1Q5TCY1 1321 aaPredicted RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 KIR2DS5A0A0G2JLQ3 304 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 TMEM272A0A1B0GTI8 110 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 SLC22A23A1A5C7 686 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 DENND3A2RUS2 1198 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 GAGE12JA6NER3 117 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 CLCA1A8K7I4 914 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 H0YGN5 161 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 KIR2DS3K7RE56 304 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 AGPSO00116 658 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 RHODO00212 210 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 RRHO14718 337 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 TPP1O14773 563 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 AREL1O15033 823 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 KRT86O43790 486 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 PQBP1O60828 265 aaKnown RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 NFATC1O95644 943 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 LCKP06239 509 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 NGFRP08138 427 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 SRGAP2BP0DMP2 458 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 FGF3P11487 239 aaPredicted RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 IL1R1P14778 569 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 CPA1P15085 419 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 RHCEP18577 417 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 ATF3P18847 181 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 MT3P25713 68 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 HOXA7P31268 230 aaPredicted RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 STAT1P42224 750 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 POLD2P49005 469 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 P2RX3P56373 397 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 NANOS2P60321 138 aaKnown RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 RHDQ02161 417 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 EGR4Q05215 589 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 DSC1Q08554 894 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 MTAPQ13126 283 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 IFIT5Q13325 482 aaKnown RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 KRT81Q14533 505 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 GBX1Q14549 363 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 NFE2Q16621 373 aaPredicted RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 AASDHQ4L235 1098 aaPredicted RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 ALG10Q5BKT4 473 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 ALG10BQ5I7T1 473 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 OTUD1Q5VV17 481 aaPredicted RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 CCDC144NLQ6NUI1 221 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 SWSAP1Q6NVH7 229 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 ERAP2Q6P179 960 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 WDR93Q6P2C0 686 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 TMEM88Q6PEY1 159 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 FBXO38Q6PIJ6 1188 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 C18orf65Q6ZTR6 163 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 CHST15Q7LFX5 561 aaPredicted RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 PIP4P1Q86T03 277 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 MORC1Q86VD1 984 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 IGFN1Q86VF2 1251 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 SESTD1Q86VW0 696 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 COL23A1Q86Y22 540 aaPredicted RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 CAMK1DQ8IU85 385 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 ANKRD13AQ8IZ07 590 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 FAM185AQ8N0U4 392 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 CLASRPQ8N2M8 674 aaKnown RBP1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 ATP11CQ8NB49 1132 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 TMEM174Q8WUU8 243 aa1.52□□□□□ -2.17
SNORD28B-201ENST00000390993 GLMPQ8WWB7 406 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms