RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 MAGED1Q9Y5V3 778 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 SPATA31A3Q5VYP0 1347 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 POLR2AP24928 1970 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TNXBP22105 4242 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SETXQ7Z333 2677 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 IGKV2D-24A0A075B6R9 120 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 IGLV5-52A0A0A0MRZ9 124 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TNFSF12-TNFSF13A0A0A6YY99 330 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 A0A1W2PR48 441 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 LINC01553A4QN01 128 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CDHR4A6H8M9 788 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 A6NNC1 897 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF785A8K8V0 405 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 FAM171A2A8MVW0 826 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 BECN2A8MW95 431 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF878C9JN71 531 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 F6X3S4 739 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 MS4A18H0YCH9 400 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 H7C1D1 291 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PANO1I0J062 215 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 FOXE1O00358 373 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SCDO00767 359 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PER2O15055 1255 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TBX3O15119 743 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 GSTA4O15217 222 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TREHO43280 583 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ADCY6O43306 1168 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 LIASO43766 372 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ICMTO60725 284 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SERPINI2O75830 405 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SOAT2O75908 522 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PRKD3O94806 890 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 MT-CO3P00414 261 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 IGHV3-13P01766 116 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 FESP07332 822 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 MELTFP08582 738 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PRSS56P0CW18 603 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CGB7P0DN87 165 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CHRNB1P11230 501 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 KRT3P12035 628 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 MYCLP12524 364 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 APEHP13798 732 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 GP9P14770 177 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ARSBP15848 533 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ALOX15P16050 662 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 GNB3P16520 340 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TFEBP19484 476 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TBPP20226 339 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ITGALP20701 1170 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 GARTP22102 1010 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 RPS6KB1P23443 525 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 IL4RP24394 825 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 FPR3P25089 353 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CD34P28906 385 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TYK2P29597 1187 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 C21orf33P30042 268 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 AXLP30530 894 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PTPN7P35236 360 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 RDXP35241 583 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 LIPAP38571 399 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 MTHFRP42898 656 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 AMTP48728 403 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 LIG4P49917 911 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF132P52740 706 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 NLRP5P59047 1200 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ZP1P60852 638 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 HERV-K104P61576 105 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 POU6F2P78424 691 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 LACTBP83111 547 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ARHGAP4P98171 946 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 XPCQ01831 940 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CFHR3Q02985 330 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 MECOMQ03112 1051 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ZBTB16Q05516 673 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 MEF2CQ06413 473 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ADCY2Q08462 1091 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 MGAT5Q09328 741 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 APOBRQ0VD83 1088 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ILF2Q12905 390 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PAK1Q13153 545 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TUBB2AQ13885 445 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM132BQ14DG7 1078 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CRY1Q16526 586 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SYT16Q17RD7 645 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 KCTD19Q17RG1 926 aaPredicted RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 LONRF2Q1L5Z9 754 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 FAM110CQ1W6H9 321 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 MPEG1Q2M385 716 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 SMTNL2Q2TAL5 461 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CDCA8Q53HL2 280 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 C2CD6Q53TS8 623 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CCDC178Q5BJE1 867 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 RNASE12Q5GAN4 147 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 EARS2Q5JPH6 523 aaKnown RBP-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 EFHC1Q5JVL4 640 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 ATAT1Q5SQI0 421 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 PIK3CD-AS1Q5SR53 167 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 MAP3K21Q5TCX8 1036 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 CACHD1Q5VU97 1274 aa-0.25□□□□□ -2.45
TRAJ28-201ENST00000390509 AFMIDQ63HM1 303 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms