RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TTC17Q96AE7 1141 aa3.9□□□□□ -1.79
TRAV40-201ENST00000390467 GDF15Q99988 308 aa3.9□□□□□ -1.79
TRAV40-201ENST00000390467 SENP7Q9BQF6 1050 aa3.9□□□□□ -1.79
TRAV40-201ENST00000390467 COG5Q9UP83 839 aa3.9□□□□□ -1.79
TRAV40-201ENST00000390467 OR2W5A6NFC9 320 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 F8W810 466 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 DHHO43323 396 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 SMAD6O43541 496 aaKnown RBP3.89□□□□□ -1.79
TRAV40-201ENST00000390467 UGDHO60701 494 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 COQ9O75208 318 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 NDUFB8O95169 186 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 EPN2O95208 641 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 MYL4P12829 197 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 MATN1P21941 496 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 STT3AP46977 705 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 AGTR2P50052 363 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 SLC12A2P55011 1212 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 DMWDQ09019 674 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 PMS2P11Q13670 270 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 ATP1A4Q13733 1029 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 PGM5Q15124 567 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 MIDNQ504T8 468 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 NUGGCQ68CJ6 796 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 CCDC144NLQ6NUI1 221 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 ACSM6Q6P461 480 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 C16orf89Q6UX73 402 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 RHPN2Q8IUC4 686 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 OR52L2PQ8NGH6 319 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 BCAS4Q8TDM0 211 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 ASB12Q8WXK4 309 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 ZNF845Q96IR2 970 aaPredicted RBP3.89□□□□□ -1.79
TRAV40-201ENST00000390467 NLRP4Q96MN2 994 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 PIMREGQ9BSJ6 248 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 ELOVL1Q9BW60 279 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 PAPOLBQ9NRJ5 636 aaKnown RBP3.89□□□□□ -1.79
TRAV40-201ENST00000390467 TMOD4Q9NZQ9 345 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 PCDHA12Q9UN75 941 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 SHROOM4Q9ULL8 1493 aa3.89□□□□□ -1.79
TRAV40-201ENST00000390467 TMEM272A0A1B0GTI8 110 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 FAM90A8PA6NJQ4 464 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 APOL1O14791 398 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 ZSCAN9O15535 394 aaPredicted RBP3.88□□□□□ -1.79
TRAV40-201ENST00000390467 CTIFO43310 598 aaKnown RBP3.88□□□□□ -1.79
TRAV40-201ENST00000390467 ATG13O75143 517 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 SLC3A2P08195 630 aaKnown RBP3.88□□□□□ -1.79
TRAV40-201ENST00000390467 FAM90A13PP0C7W8 464 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 FAM90A24PP0C7X0 464 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 HARSP12081 509 aaKnown RBP3.88□□□□□ -1.79
TRAV40-201ENST00000390467 EGR1P18146 543 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 TFEBP19484 476 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 SEMA3BQ13214 749 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 SLC5A9Q2M3M2 681 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 ASPHD1Q5U4P2 390 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 TTLL5Q6EMB2 1281 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 KIAA1161Q6NSJ0 714 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 USP17L6PQ6QN14 398 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 RFX8Q6ZV50 586 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 BEND5Q7L4P6 421 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 LAS2Q8IYD9 372 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 ADGRF4Q8IZF3 695 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 GLIS1Q8NBF1 620 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 ACRBPQ8NEB7 543 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 ASB5Q8WWX0 329 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 EME1Q96AY2 570 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 TBCBQ99426 244 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 COLEC11Q9BWP8 271 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 TTLL2Q9BWV7 592 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 FSCN3Q9NQT6 498 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 RXFP3Q9NSD7 469 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 MAN2B2Q9Y2E5 1009 aa3.88□□□□□ -1.79
TRAV40-201ENST00000390467 FAM234BA2RU67 622 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 TTC34A8MYJ7 566 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 GTPBP1O00178 669 aaKnown RBP3.87□□□□□ -1.79
TRAV40-201ENST00000390467 APAF1O14727 1248 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 NCK2O43639 380 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 GSTM5P46439 218 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 INPP5JQ15735 1006 aaPredicted RBP3.87□□□□□ -1.79
TRAV40-201ENST00000390467 SLC35G1Q2M3R5 365 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 PRTGQ2VWP7 1150 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 DAB2IPQ5VWQ8 1189 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 ZNF474Q6S9Z5 364 aaPredicted RBP3.87□□□□□ -1.79
TRAV40-201ENST00000390467 DHRS13Q6UX07 377 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 UEVLDQ8IX04 471 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 ARL14EPQ8N8R7 260 aaPredicted RBP3.87□□□□□ -1.79
TRAV40-201ENST00000390467 SLC44A5Q8NCS7 719 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 ZFPM2Q8WW38 1151 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 GLMPQ8WWB7 406 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 OVCA2Q8WZ82 227 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 NPIPB3Q92617 1050 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 GRAMD1AQ96CP6 724 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 LYZL4Q96KX0 146 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 SNX27Q96L92 541 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 GPR78Q96P69 363 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 TUBB6Q9BUF5 446 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 AAMDCQ9H7C9 122 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 THSD1Q9NS62 852 aa3.87□□□□□ -1.79
TRAV40-201ENST00000390467 AGO2Q9UKV8 859 aaKnown RBP3.87□□□□□ -1.79
TRAV40-201ENST00000390467 A6NNC1 897 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 PMM2O15305 246 aa3.86□□□□□ -1.79
TRAV40-201ENST00000390467 KAT7O95251 611 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms