RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 APOA1P02647 267 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 PTGER2P43116 358 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 CBX3Q13185 183 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 PDK2Q15119 407 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 C6orf10Q5SRN2 563 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 CDC26Q8NHZ8 85 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 ERLEC1Q96DZ1 483 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 WDR41Q9HAD4 459 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 SCHIP1Q9P0W5 487 aaPredicted RBP14.64□□□□□ -0.07
RTF1-201ENST00000389629 SLC7A8Q9UHI5 535 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 FDFT1P37268 417 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 SFSWAPQ12872 951 aaKnown RBP14.64□□□□□ -0.07
RTF1-201ENST00000389629 KRT72Q14CN4 511 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 GALNTL6Q49A17 601 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 OTUD3Q5T2D3 398 aaPredicted RBP14.64□□□□□ -0.07
RTF1-201ENST00000389629 RNASEH2BQ5TBB1 312 aaKnown RBP14.64□□□□□ -0.07
RTF1-201ENST00000389629 MON1BQ7L1V2 547 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 DAW1Q8N136 415 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 CPT1BQ92523 772 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 ASTN2O75129 1339 aaPredicted RBP14.63□□□□□ -0.07
RTF1-201ENST00000389629 TPP1O14773 563 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 TCEA3O75764 348 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 DLGAP3O95886 979 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 HMGCRP04035 888 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 GFAPP14136 432 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 EIF4BP23588 611 aaKnown RBP14.63□□□□□ -0.07
RTF1-201ENST00000389629 NAA20P61599 178 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 XRRA1Q6P2D8 792 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 C4orf22Q6V702 233 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 BBS12Q6ZW61 710 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 NANOGNBQ7Z5D8 188 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 RGL2O15211 777 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 TUBP50607 506 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 TMTC4Q5T4D3 741 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 NIPA1Q7RTP0 329 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 TTC39CQ8N584 583 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 ZNF555Q8NEP9 628 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 GLIS2Q9BZE0 524 aaPredicted RBP14.63□□□□□ -0.07
RTF1-201ENST00000389629 PLGRKTQ9HBL7 147 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 ZNF180Q9UJW8 692 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 DMTF1Q9Y222 760 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 SH3GLB1Q9Y371 365 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 A0A1B0GVG6 124 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 LPIN1Q14693 890 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 Q3C1V9 767 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 CDCA2Q69YH5 1023 aaPredicted RBP14.63□□□□□ -0.07
RTF1-201ENST00000389629 CROCCP3Q8IVE0 287 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 GLIS1Q8NBF1 620 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 DRAXINQ8NBI3 349 aaPredicted RBP14.63□□□□□ -0.07
RTF1-201ENST00000389629 SKA2Q8WVK7 121 aaPredicted RBP14.63□□□□□ -0.07
RTF1-201ENST00000389629 CCDC167Q9P0B6 97 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 MYH7P12883 1935 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 HEATR9A2RTY3 570 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 GOLGA8TH3BQL2 631 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 TRIM13O60858 407 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 CCDC130P13994 396 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 GNL1P36915 607 aaPredicted RBP14.63□□□□□ -0.07
RTF1-201ENST00000389629 C15orf59Q2T9L4 293 aaPredicted RBP14.63□□□□□ -0.07
RTF1-201ENST00000389629 TDRPQ86YL5 185 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 MICU2Q8IYU8 434 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 TNS4Q8IZW8 715 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 TXLNGYQ9BZA5 131 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 CHST12Q9NRB3 414 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 SELENONQ9NZV5 590 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 RABGEF1Q9UJ41 708 aa14.63□□□□□ -0.07
RTF1-201ENST00000389629 ETFBP38117 255 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 VWA5B1Q5TIE3 1220 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 IER5Q5VY09 327 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 ADGRD1Q6QNK2 874 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 HACE1Q8IYU2 909 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 BEST2Q8NFU1 509 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 IARS2Q9NSE4 1012 aaKnown RBP14.62□□□□□ -0.07
RTF1-201ENST00000389629 TMA7Q9Y2S6 64 aaKnown RBP14.62□□□□□ -0.07
RTF1-201ENST00000389629 A0A087WXM4 84 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 HUS1O60921 280 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 CYP2F1P24903 491 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 CNTFP26441 200 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 CAPRIN1Q14444 709 aaKnown RBP14.62□□□□□ -0.07
RTF1-201ENST00000389629 DCAF6Q58WW2 860 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 PERM1Q5SV97 790 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 ACOT1Q86TX2 421 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 CCDC60Q8IWA6 550 aaPredicted RBP14.62□□□□□ -0.07
RTF1-201ENST00000389629 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.62□□□□□ -0.07
RTF1-201ENST00000389629 BLOC1S6Q9UL45 172 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 SORCS3Q9UPU3 1222 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 GNEQ9Y223 722 aaKnown RBP14.62□□□□□ -0.07
RTF1-201ENST00000389629 MYH7BA7E2Y1 1941 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 SPDYE2BA6NHP3 402 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 TRPC5OSA6NMA1 111 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 SPDYE6P0CI01 402 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 CXCL8P10145 99 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 MGAT1P26572 445 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 ARHGDIAP52565 204 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 TPI1P60174 286 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 PRAMEF18Q5VWM3 479 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 KYAT3Q6YP21 454 aaKnown RBP14.62□□□□□ -0.07
RTF1-201ENST00000389629 SLCO2A1Q92959 643 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 TMEM176AQ96HP8 235 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 PLEKHG4BQ96PX9 1271 aa14.62□□□□□ -0.07
RTF1-201ENST00000389629 TBC1D4O60343 1298 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms