RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 EFEMP1Q12805 493 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 BIRC3Q13489 604 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 CAMK2GQ13555 558 aaPredicted RBP10.12□□□□□ -0.79
IFT88-203ENST00000389373 EIF4HQ15056 248 aaKnown RBP10.12□□□□□ -0.79
IFT88-203ENST00000389373 SHBQ15464 509 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 SNRNP35Q16560 246 aaKnown RBP10.12□□□□□ -0.79
IFT88-203ENST00000389373 TTC31Q49AM3 519 aaPredicted RBP10.12□□□□□ -0.79
IFT88-203ENST00000389373 ZNF667Q5HYK9 610 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 ERICH1Q86X53 443 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 DENND1CQ8IV53 801 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 C12orf29Q8N999 325 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 SAP25Q8TEE9 199 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 HPS3Q969F9 1004 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 WBP1Q96G27 269 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 DCLK3Q9C098 648 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 SDCBP2Q9H190 292 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 SGK2Q9HBY8 427 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.12□□□□□ -0.79
IFT88-203ENST00000389373 AGO1Q9UL18 857 aaKnown RBP10.12□□□□□ -0.79
IFT88-203ENST00000389373 SCML2Q9UQR0 700 aa10.12□□□□□ -0.79
IFT88-203ENST00000389373 A0A1W2PPC4 97 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 KLK10O43240 276 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 BMP15O95972 392 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 MT-CO3P00414 261 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 IGHV4-34P06331 123 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 FAM200BP0CF97 657 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 RALAP11233 206 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 CD38P28907 300 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 GJB2P29033 226 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 PCBP4P57723 403 aaKnown RBP10.11□□□□□ -0.79
IFT88-203ENST00000389373 COG7P83436 770 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 CYP24A1Q07973 514 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 PSMD6Q15008 389 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 ZNF699Q32M78 642 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 STXBP4Q6ZWJ1 553 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 CHST9Q7L1S5 443 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 TADA2BQ86TJ2 420 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 CCDC65Q8IXS2 484 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 TSC1Q92574 1164 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 ORAI3Q9BRQ5 295 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.11□□□□□ -0.79
IFT88-203ENST00000389373 TRIM4Q9C037 500 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 XYLT2Q9H1B5 865 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 MTG2Q9H4K7 406 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 CSNK1G1Q9HCP0 422 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 PRSS16Q9NQE7 514 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 GDF3Q9NR23 364 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 WDR70Q9NW82 654 aa10.11□□□□□ -0.79
IFT88-203ENST00000389373 SLC12A8A0AV02 714 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 MPOP05164 745 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 CKMT2P17540 419 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 TXLNAP40222 546 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 ARRB1P49407 418 aaPredicted RBP10.1□□□□□ -0.79
IFT88-203ENST00000389373 NDST1P52848 882 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 GALCP54803 685 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 UCNP55089 124 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 INSM1Q01101 510 aaPredicted RBP10.1□□□□□ -0.79
IFT88-203ENST00000389373 PKDCCQ504Y2 493 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 ZNF776Q68DI1 518 aaPredicted RBP10.1□□□□□ -0.79
IFT88-203ENST00000389373 KLHDC10Q6PID8 442 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 NCEH1Q6PIU2 408 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 DHX40Q8IX18 779 aaKnown RBP10.1□□□□□ -0.79
IFT88-203ENST00000389373 NELFCDQ8IXH7 590 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 RBBP8NLQ8NC74 664 aaPredicted RBP10.1□□□□□ -0.79
IFT88-203ENST00000389373 KCNE4Q8WWG9 221 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 CLIC6Q96NY7 704 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 SLC2A11Q9BYW1 496 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 EBF2Q9HAK2 575 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 ABCB8Q9NUT2 735 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 FBXL12Q9NXK8 326 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 HMGXB4Q9UGU5 601 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 SUN2Q9UH99 717 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 ADAMTS1Q9UHI8 967 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 PCDHB1Q9Y5F3 818 aa10.1□□□□□ -0.79
IFT88-203ENST00000389373 HEMK1Q9Y5R4 338 aaPredicted RBP10.1□□□□□ -0.79
IFT88-203ENST00000389373 A0A1W2PP55 124 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 HHLA1C9JL84 531 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 WNT9AO14904 365 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 YKT6O15498 198 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 STAU1O95793 577 aaKnown RBP10.09□□□□□ -0.79
IFT88-203ENST00000389373 TRIM21P19474 475 aaKnown RBP10.09□□□□□ -0.79
IFT88-203ENST00000389373 EPHA8P29322 1005 aaPredicted RBP10.09□□□□□ -0.79
IFT88-203ENST00000389373 STAT6P42226 847 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 CASP4P49662 377 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 GABREP78334 506 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 DAB2P98082 770 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 ZBTB16Q05516 673 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 VAC14Q08AM6 782 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 ILKQ13418 452 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 MPPE1Q53F39 396 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 SLC45A4Q5BKX6 768 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 KIAA1614Q5VZ46 1190 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 CLEC20AQ6ZU45 233 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 RSRC2Q7L4I2 434 aaKnown RBP10.09□□□□□ -0.79
IFT88-203ENST00000389373 SCD5Q86SK9 330 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 XXYLT1Q8NBI6 393 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 TTC9Q92623 222 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 CYFIP2Q96F07 1278 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 SERAC1Q96JX3 654 aa10.09□□□□□ -0.79
IFT88-203ENST00000389373 ZNF578Q96N58 590 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms