RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZNF23P17027 643 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 TNFSF9P41273 254 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 ZFP1Q6P2D0 407 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 LRRC8BQ6P9F7 803 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 MPZL3Q6UWV2 235 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 DPP9Q86TI2 863 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 C10orf107Q8IVU9 208 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 NAT14Q8WUY8 206 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 HTR3CQ8WXA8 447 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 MAML3Q96JK9 1138 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 ZNF395Q9H8N7 513 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 AAASQ9NRG9 546 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 SLC7A8Q9UHI5 535 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 ATP8B3O60423 1300 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 SNX2O60749 519 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 ALBP02768 609 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 TXNP10599 105 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 TCF4P15884 667 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 PSMA4P25789 261 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 EPHA3P29320 983 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 NDST1P52848 882 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 GRIK3Q13003 919 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 NEDD8Q15843 81 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 TSPAN14Q8NG11 270 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 ACOT9Q9Y305 439 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 PHGDHO43175 533 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 TGDSO95455 350 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 RAB27AP51159 221 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 AQP4P55087 323 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 USP46P62068 366 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 GAD2Q05329 585 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 ZC3H12AQ5D1E8 599 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 FAM136AQ96C01 138 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 LMO7Q8WWI1 1683 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 HEATR9A2RTY3 570 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 TM4SF1P30408 202 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 ARCQ7LC44 396 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 PQLC1Q8N2U9 271 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 BSNDQ8WZ55 320 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 SLCO2A1Q92959 643 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 LRRC39Q96DD0 335 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 TNIP3Q96KP6 325 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 ZBTB18Q99592 522 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 PIF1Q9H611 641 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 NMRAL1Q9HBL8 299 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 LNPEPQ9UIQ6 1025 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 MYH15Q9Y2K3 1946 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 ATP5BP06576 529 aaKnown RBP13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 GNL1P36915 607 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 CCNA1P78396 465 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 PRKAA1Q13131 559 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 TBCELQ5QJ74 424 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 CMC1Q7Z7K0 106 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 KIAA2013Q8IYS2 634 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 RNF157Q96PX1 679 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 EBF4Q9BQW3 602 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 TRPC7Q9HCX4 862 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 DPP3Q9NY33 737 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 VANGL2Q9ULK5 521 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 C1orf232A0A0U1RR37 186 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 ESRRBO95718 433 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 STAG3L1P0CL83 205 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 RARBP10826 455 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 CA8P35219 290 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 CCDC153Q494R4 210 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 C15orf52Q6ZUT6 534 aaKnown RBP13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 PATL1Q86TB9 770 aaKnown RBP13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 SAMD3Q8N6K7 520 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 ZNF280CQ8ND82 737 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 RCN3Q96D15 328 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 PHF21BQ96EK2 531 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 MMP19Q99542 508 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 EBNA1BP2Q99848 306 aaKnown RBP13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 TXLNGYQ9BZA5 131 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 RRN3Q9NYV6 651 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 NCKIPSDQ9NZQ3 722 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 PPM1HQ9ULR3 514 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 SNCAIPQ9Y6H5 919 aa13.48□□□□□ -0.25
TRAPPC9-201ENST00000389328 M0R3G1 203 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 RNF103O00237 685 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 UBDO15205 165 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 MAGEB2O15479 319 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 TMEM63AO94886 807 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 TRUB2O95900 331 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 CFHP08603 1231 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 UNGP13051 313 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 KCNA2P16389 499 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 POLD1P28340 1107 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 ADSSP30520 456 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 HSD17B4P51659 736 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 CSHL1Q14406 222 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 PTPN20Q4JDL3 420 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 ANGEL2Q5VTE6 544 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 NIPA1Q7RTP0 329 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 TMC7Q7Z402 723 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 ADCK1Q86TW2 530 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 FBXW8Q8N3Y1 598 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 TMCO5AQ8N6Q1 288 aa13.47□□□□□ -0.25
TRAPPC9-201ENST00000389328 EPB41L4BQ9H329 900 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms