RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 BECN1Q14457 450 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 MPPE1Q53F39 396 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 ZNF394Q53GI3 561 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 C1orf220Q5T0J3 134 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 C19orf48Q6RUI8 117 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 SLCO6A1Q86UG4 719 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 CACUL1Q86Y37 369 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 FAM186BQ8IYM0 893 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 GALNT15Q8N3T1 639 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 OR2T3Q8NH03 318 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 FAXDC2Q96IV6 333 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 LHX5Q9H2C1 402 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 MMRN2Q9H8L6 949 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 FBRSQ9HAH7 460 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 IL21RQ9HBE5 538 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 OLA1Q9NTK5 396 aaKnown RBP16.74■□□□□ 0.27
VCX3A-201ENST00000381089 PLA2G4CQ9UP65 541 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 NBEAQ8NFP9 2946 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 TRIM49P0CI25 452 aa16.73■□□□□ 0.27
VCX3A-201ENST00000381089 TRIM49CP0CI26 452 aa16.73■□□□□ 0.27
VCX3A-201ENST00000381089 PRKCHP24723 683 aa16.73■□□□□ 0.27
VCX3A-201ENST00000381089 PSMC2P35998 433 aaKnown RBP16.73■□□□□ 0.27
VCX3A-201ENST00000381089 NFIL3Q16649 462 aa16.73■□□□□ 0.27
VCX3A-201ENST00000381089 FNDC3BQ53EP0 1204 aaKnown RBP16.73■□□□□ 0.27
VCX3A-201ENST00000381089 PDZD3Q86UT5 571 aa16.73■□□□□ 0.27
VCX3A-201ENST00000381089 FAM124AQ86V42 546 aa16.73■□□□□ 0.27
VCX3A-201ENST00000381089 WFIKKN2Q8TEU8 576 aa16.73■□□□□ 0.27
VCX3A-201ENST00000381089 TMEM8AQ9HCN3 771 aa16.73■□□□□ 0.27
VCX3A-201ENST00000381089 FNDC3AQ9Y2H6 1198 aaKnown RBP16.73■□□□□ 0.27
VCX3A-201ENST00000381089 CKAP5Q14008 2032 aa16.73■□□□□ 0.27
VCX3A-201ENST00000381089 ACACAQ13085 2346 aa16.73■□□□□ 0.27
VCX3A-201ENST00000381089 A0A1B0GVT2 93 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 GTF2H1P32780 548 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 PPP3CAQ08209 521 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 PDE4CQ08493 712 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 COL28A1Q2UY09 1125 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 INAVAQ3KP66 663 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 KRT39Q6A163 491 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 TMPRSS7Q7RTY8 843 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 PIGZQ86VD9 579 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 FAM217AQ8IXS0 508 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 MDM1Q8TC05 714 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 RNF139Q8WU17 664 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 SORCS1Q8WY21 1168 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 P2RY11Q96G91 374 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 TMEM176AQ96HP8 235 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 LAMA5O15230 3695 aa16.72■□□□□ 0.27
VCX3A-201ENST00000381089 STX10O60499 249 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 ZBED1O96006 694 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 DNTTP04053 509 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 CSNK1EP49674 416 aaKnown RBP16.71■□□□□ 0.27
VCX3A-201ENST00000381089 TKTL1P51854 596 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 ZBTB16Q05516 673 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 CAMK2GQ13555 558 aaPredicted RBP16.71■□□□□ 0.27
VCX3A-201ENST00000381089 TTC31Q49AM3 519 aaPredicted RBP16.71■□□□□ 0.27
VCX3A-201ENST00000381089 RAB41Q5JT25 222 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 ARHGAP17Q68EM7 881 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 DBX2Q6ZNG2 339 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 ANKRD52Q8NB46 1076 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 BAHD1Q8TBE0 780 aaPredicted RBP16.71■□□□□ 0.27
VCX3A-201ENST00000381089 IPO9Q96P70 1041 aaKnown RBP16.71■□□□□ 0.27
VCX3A-201ENST00000381089 ARID3AQ99856 593 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 BTBD1Q9H0C5 482 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 LRRC4Q9HBW1 653 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 OSGEPQ9NPF4 335 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 CISHQ9NSE2 258 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 RCOR1Q9UKL0 485 aa16.71■□□□□ 0.27
VCX3A-201ENST00000381089 HBS1LQ9Y450 684 aaKnown RBP16.71■□□□□ 0.27
VCX3A-201ENST00000381089 ITPR1Q14643 2758 aa16.71■□□□□ 0.26
VCX3A-201ENST00000381089 PLXNB3Q9ULL4 1909 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 EIF4E1BA6NMX2 242 aaKnown RBP16.7■□□□□ 0.26
VCX3A-201ENST00000381089 GOLGA8CPA6NN73 597 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 SEMA4FO95754 770 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 ATP5BP06576 529 aaKnown RBP16.7■□□□□ 0.26
VCX3A-201ENST00000381089 HLA-EP13747 358 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 PFKFB1P16118 471 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 GRK6P43250 576 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 GRIA4P48058 902 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 MXI1P50539 228 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 CCT8P50990 548 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 BNC1Q01954 994 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 ADAM9Q13443 819 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 TRIP4Q15650 581 aaPredicted RBP16.7■□□□□ 0.26
VCX3A-201ENST00000381089 KIF19Q2TAC6 998 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 TMEM215Q68D42 235 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 CHST9Q7L1S5 443 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 ADAT2Q7Z6V5 191 aaKnown RBP16.7■□□□□ 0.26
VCX3A-201ENST00000381089 FMNL3Q8IVF7 1028 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 AHI1Q8N157 1196 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 ZNF557Q8N988 423 aaPredicted RBP16.7■□□□□ 0.26
VCX3A-201ENST00000381089 SLC4A11Q8NBS3 891 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 RBBP8NLQ8NC74 664 aaPredicted RBP16.7■□□□□ 0.26
VCX3A-201ENST00000381089 FBXL13Q8NEE6 735 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 C1orf216Q8TAB5 229 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 GOLGA1Q92805 767 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 IGSF8Q969P0 613 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 TMA16Q96EY4 203 aaKnown RBP16.7■□□□□ 0.26
VCX3A-201ENST00000381089 C6orf106Q9H6K1 298 aaPredicted RBP16.7■□□□□ 0.26
VCX3A-201ENST00000381089 SCUBE2Q9NQ36 999 aa16.7■□□□□ 0.26
VCX3A-201ENST00000381089 DKK4Q9UBT3 224 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms