RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 USP36Q9P275 1121 aaKnown RBP17.62■□□□□ 0.41
SMN2-201ENST00000380741 SFMBT1Q9UHJ3 866 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 MUC22E2RYF6 1773 aaPredicted RBP17.61■□□□□ 0.41
SMN2-201ENST00000380741 UPK3BL1B0FP48 263 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 UPK3BL2E5RIL1 263 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 SYNCRIPO60506 623 aaKnown RBP17.61■□□□□ 0.41
SMN2-201ENST00000380741 SETSIPP0DME0 302 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 TBXAS1P24557 533 aaPredicted RBP17.61■□□□□ 0.41
SMN2-201ENST00000380741 PRKCHP24723 683 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 MAOBP27338 520 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 HOXD9P28356 352 aaPredicted RBP17.61■□□□□ 0.41
SMN2-201ENST00000380741 FMO5P49326 533 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 HARS2P49590 506 aaKnown RBP17.61■□□□□ 0.41
SMN2-201ENST00000380741 EIF4HQ15056 248 aaKnown RBP17.61■□□□□ 0.41
SMN2-201ENST00000380741 PKDCCQ504Y2 493 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 SYCP2LQ5T4T6 812 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 TMPRSS6Q8IU80 811 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 RNF139Q8WU17 664 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 KCTD13Q8WZ19 329 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 FOXJ1Q92949 421 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 TOE1Q96GM8 510 aaKnown RBP17.61■□□□□ 0.41
SMN2-201ENST00000380741 SCNM1Q9BWG6 230 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 ADAM33Q9BZ11 813 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 ITM2CQ9NQX7 267 aa17.61■□□□□ 0.41
SMN2-201ENST00000380741 WSB2Q9NYS7 404 aaPredicted RBP17.61■□□□□ 0.41
SMN2-201ENST00000380741 HBS1LQ9Y450 684 aaKnown RBP17.61■□□□□ 0.41
SMN2-201ENST00000380741 SPAARA0A1B0GVQ0 90 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 KCNJ18B7U540 433 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 MSI1O43347 362 aaKnown RBP17.6■□□□□ 0.41
SMN2-201ENST00000380741 TSPAN3O60637 253 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 SYPP08247 313 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 LCP1P13796 627 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 TPMTP51580 245 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 COPAP53621 1224 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 DAOAP59103 153 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 PLEKHG6Q3KR16 790 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 MPPE1Q53F39 396 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 WDR45BQ5MNZ6 344 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 TMEM270Q6UE05 265 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 CACUL1Q86Y37 369 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 TFAP2BQ92481 460 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 SIPA1Q96FS4 1042 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 GPR174Q9BXC1 333 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 TMEM121BQ9BXQ6 578 aaPredicted RBP17.6■□□□□ 0.41
SMN2-201ENST00000380741 CNGB3Q9NQW8 809 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 ABCC13Q9NSE7 274 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 SUSD2Q9UGT4 822 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 KIAA1257Q9ULG3 409 aa17.6■□□□□ 0.41
SMN2-201ENST00000380741 PSMA7O14818 248 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 EPHX1P07099 455 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 NCAM1P13591 858 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 CD59P13987 128 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 GNSP15586 552 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 CD44P16070 742 aaKnown RBP17.59■□□□□ 0.41
SMN2-201ENST00000380741 HLA-FP30511 346 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 RGS7P49802 495 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 SIM1P81133 766 aaPredicted RBP17.59■□□□□ 0.41
SMN2-201ENST00000380741 E2F5Q15329 346 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 ISM2Q6H9L7 571 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 LCLAT1Q6UWP7 414 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 SERPINA13PQ6UXR4 307 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 PRCCQ92733 491 aaPredicted RBP17.59■□□□□ 0.41
SMN2-201ENST00000380741 TIGD1Q96MW7 591 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 ZSWIM1Q9BR11 485 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 GTPBP4Q9BZE4 634 aaKnown RBP17.59■□□□□ 0.41
SMN2-201ENST00000380741 METTL14Q9HCE5 456 aaKnown RBP17.59■□□□□ 0.41
SMN2-201ENST00000380741 DNAAF2Q9NVR5 837 aaKnown RBP17.59■□□□□ 0.41
SMN2-201ENST00000380741 STOML2Q9UJZ1 356 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 NUMA1Q14980 2115 aa17.59■□□□□ 0.41
SMN2-201ENST00000380741 MEI4A8MW99 385 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 PIK3R2O00459 728 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 TIMM44O43615 452 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 GABBR2O75899 941 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 LATS1O95835 1130 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 PAEPP09466 180 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 HLA-EP13747 358 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 SGSHP51688 502 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 ZNF445P59923 1031 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 FAM193AP78312 1265 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 ARID5AQ03989 594 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 STIM1Q13586 685 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 ADGRF1Q5T601 910 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 PMF1Q6P1K2 205 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 SCML4Q8N228 414 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 SLC35F5Q8WV83 523 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 DNASE2BQ8WZ79 361 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 KAT5Q92993 513 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 DHTKD1Q96HY7 919 aaPredicted RBP17.58■□□□□ 0.4
SMN2-201ENST00000380741 CEP63Q96MT8 703 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 NT5C1BQ96P26 610 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 HOOK1Q9UJC3 728 aaKnown RBP17.58■□□□□ 0.4
SMN2-201ENST00000380741 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.58■□□□□ 0.4
SMN2-201ENST00000380741 PCDHB4Q9Y5E5 795 aa17.58■□□□□ 0.4
SMN2-201ENST00000380741 M0QYV0 167 aa17.57■□□□□ 0.4
SMN2-201ENST00000380741 RNF225M0QZC1 329 aaPredicted RBP17.57■□□□□ 0.4
SMN2-201ENST00000380741 PMM2O15305 246 aa17.57■□□□□ 0.4
SMN2-201ENST00000380741 HYAL3O43820 417 aaPredicted RBP17.57■□□□□ 0.4
SMN2-201ENST00000380741 GJB3O75712 270 aa17.57■□□□□ 0.4
SMN2-201ENST00000380741 CALCAP01258 141 aa17.57■□□□□ 0.4
SMN2-201ENST00000380741 IGLV3-19P01714 112 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms