RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 HLA-EP13747 358 aa24.16■■□□□ 1.46
U2AF1-202ENST00000380276 HOXB3P14651 431 aaPredicted RBP24.16■■□□□ 1.46
U2AF1-202ENST00000380276 MATKP42679 507 aa24.16■■□□□ 1.46
U2AF1-202ENST00000380276 HARS2P49590 506 aaKnown RBP24.16■■□□□ 1.46
U2AF1-202ENST00000380276 COPAP53621 1224 aa24.16■■□□□ 1.46
U2AF1-202ENST00000380276 ENPEPQ07075 957 aa24.16■■□□□ 1.46
U2AF1-202ENST00000380276 COL9A2Q14055 689 aaPredicted RBP24.16■■□□□ 1.46
U2AF1-202ENST00000380276 DCAF17Q5H9S7 520 aaPredicted RBP24.16■■□□□ 1.46
U2AF1-202ENST00000380276 TCERG1LQ5VWI1 586 aa24.16■■□□□ 1.46
U2AF1-202ENST00000380276 FMNL3Q8IVF7 1028 aa24.16■■□□□ 1.46
U2AF1-202ENST00000380276 ANKRD52Q8NB46 1076 aa24.16■■□□□ 1.46
U2AF1-202ENST00000380276 METTL12A8MUP2 240 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 CD19P15391 556 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 ENPP2Q13822 863 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 MPPE1Q53F39 396 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 RAB41Q5JT25 222 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 ARHGAP17Q68EM7 881 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 ADAMTS14Q8WXS8 1223 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 TATDN2Q93075 761 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 IPO9Q96P70 1041 aaKnown RBP24.15■■□□□ 1.46
U2AF1-202ENST00000380276 SLC2A11Q9BYW1 496 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 UBXN6Q9BZV1 441 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 OLA1Q9NTK5 396 aaKnown RBP24.15■■□□□ 1.46
U2AF1-202ENST00000380276 HESX1Q9UBX0 185 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 SFMBT1Q9UHJ3 866 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 AKAP13Q12802 2813 aa24.15■■□□□ 1.46
U2AF1-202ENST00000380276 TULP2O00295 520 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 PDE4CQ08493 712 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 SCAPQ12770 1279 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 TMEM215Q68D42 235 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 IL27RAQ6UWB1 636 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 KRBA2Q6ZNG9 492 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 SMYD4Q8IYR2 804 aaPredicted RBP24.14■■□□□ 1.45
U2AF1-202ENST00000380276 ZNF366Q8N895 744 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 OR2T3Q8NH03 318 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 CYB5D2Q8WUJ1 264 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 EDEM1Q92611 657 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 LHX5Q9H2C1 402 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 TM7SF3Q9NS93 570 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 TSPAN16Q9UKR8 245 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 PCOLCE2Q9UKZ9 415 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 NFE2L3Q9Y4A8 694 aa24.14■■□□□ 1.45
U2AF1-202ENST00000380276 FAM221BA6H8Z2 402 aa24.13■■□□□ 1.45
U2AF1-202ENST00000380276 GOLGA8CPA6NN73 597 aa24.13■■□□□ 1.45
U2AF1-202ENST00000380276 CETN3O15182 167 aa24.13■■□□□ 1.45
U2AF1-202ENST00000380276 TIMM44O43615 452 aa24.13■■□□□ 1.45
U2AF1-202ENST00000380276 BCAT1P54687 386 aa24.13■■□□□ 1.45
U2AF1-202ENST00000380276 ADIGQ0VDE8 80 aa24.13■■□□□ 1.45
U2AF1-202ENST00000380276 LRSAM1Q6UWE0 723 aa24.13■■□□□ 1.45
U2AF1-202ENST00000380276 SIX6OS1Q8N1H7 587 aa24.13■■□□□ 1.45
U2AF1-202ENST00000380276 FAXDC2Q96IV6 333 aa24.13■■□□□ 1.45
U2AF1-202ENST00000380276 PLA2G4CQ9UP65 541 aa24.13■■□□□ 1.45
U2AF1-202ENST00000380276 FNDC3AQ9Y2H6 1198 aaKnown RBP24.13■■□□□ 1.45
U2AF1-202ENST00000380276 FAM208BQ5VWN6 2430 aa24.13■■□□□ 1.45
U2AF1-202ENST00000380276 A0A1B0GVT2 93 aa24.12■■□□□ 1.45
U2AF1-202ENST00000380276 XPO1O14980 1071 aaKnown RBP24.12■■□□□ 1.45
U2AF1-202ENST00000380276 HOXD9P28356 352 aaPredicted RBP24.12■■□□□ 1.45
U2AF1-202ENST00000380276 TRIP4Q15650 581 aaPredicted RBP24.12■■□□□ 1.45
U2AF1-202ENST00000380276 HLA-BQ31612 363 aa24.12■■□□□ 1.45
U2AF1-202ENST00000380276 ZCWPW2Q504Y3 356 aa24.12■■□□□ 1.45
U2AF1-202ENST00000380276 SGO2Q562F6 1265 aa24.12■■□□□ 1.45
U2AF1-202ENST00000380276 CHST9Q7L1S5 443 aa24.12■■□□□ 1.45
U2AF1-202ENST00000380276 PROSER1Q86XN7 944 aa24.12■■□□□ 1.45
U2AF1-202ENST00000380276 UBA3Q8TBC4 463 aa24.12■■□□□ 1.45
U2AF1-202ENST00000380276 ABCB8Q9NUT2 735 aa24.12■■□□□ 1.45
U2AF1-202ENST00000380276 BST2Q10589 180 aaKnown RBP24.11■■□□□ 1.45
U2AF1-202ENST00000380276 EDRF1Q3B7T1 1238 aa24.11■■□□□ 1.45
U2AF1-202ENST00000380276 PM20D1Q6GTS8 502 aa24.11■■□□□ 1.45
U2AF1-202ENST00000380276 FAM217AQ8IXS0 508 aa24.11■■□□□ 1.45
U2AF1-202ENST00000380276 RHBDD1Q8TEB9 315 aa24.11■■□□□ 1.45
U2AF1-202ENST00000380276 WFIKKN2Q8TEU8 576 aa24.11■■□□□ 1.45
U2AF1-202ENST00000380276 TMA16Q96EY4 203 aaKnown RBP24.11■■□□□ 1.45
U2AF1-202ENST00000380276 CCDC86Q9H6F5 360 aaKnown RBP24.11■■□□□ 1.45
U2AF1-202ENST00000380276 C6orf106Q9H6K1 298 aaPredicted RBP24.11■■□□□ 1.45
U2AF1-202ENST00000380276 HBS1LQ9Y450 684 aaKnown RBP24.11■■□□□ 1.45
U2AF1-202ENST00000380276 CKAP5Q14008 2032 aa24.11■■□□□ 1.45
U2AF1-202ENST00000380276 TAF4O00268 1085 aa24.1■■□□□ 1.45
U2AF1-202ENST00000380276 MSI1O43347 362 aaKnown RBP24.1■■□□□ 1.45
U2AF1-202ENST00000380276 IGLV3-19P01714 112 aa24.1■■□□□ 1.45
U2AF1-202ENST00000380276 LCP1P13796 627 aa24.1■■□□□ 1.45
U2AF1-202ENST00000380276 HLA-FP30511 346 aa24.1■■□□□ 1.45
U2AF1-202ENST00000380276 CSNK1EP49674 416 aaKnown RBP24.1■■□□□ 1.45
U2AF1-202ENST00000380276 YWHAEP62258 255 aaKnown RBP24.1■■□□□ 1.45
U2AF1-202ENST00000380276 BNC1Q01954 994 aa24.1■■□□□ 1.45
U2AF1-202ENST00000380276 LRMPQ12912 555 aa24.1■■□□□ 1.45
U2AF1-202ENST00000380276 BSPRYQ5W0U4 402 aa24.1■■□□□ 1.45
U2AF1-202ENST00000380276 C19orf48Q6RUI8 117 aa24.1■■□□□ 1.45
U2AF1-202ENST00000380276 SLCO6A1Q86UG4 719 aa24.1■■□□□ 1.45
U2AF1-202ENST00000380276 RBBP8NLQ8NC74 664 aaPredicted RBP24.1■■□□□ 1.45
U2AF1-202ENST00000380276 GOLPH3LQ9H4A5 285 aa24.1■■□□□ 1.45
U2AF1-202ENST00000380276 GGA2Q9UJY4 613 aa24.1■■□□□ 1.45
U2AF1-202ENST00000380276 DNTTP04053 509 aa24.09■■□□□ 1.45
U2AF1-202ENST00000380276 ACSL1P33121 698 aa24.09■■□□□ 1.45
U2AF1-202ENST00000380276 AFF3P51826 1226 aaKnown RBP24.09■■□□□ 1.45
U2AF1-202ENST00000380276 ZNF445P59923 1031 aa24.09■■□□□ 1.45
U2AF1-202ENST00000380276 CAMK2GQ13555 558 aaPredicted RBP24.09■■□□□ 1.45
U2AF1-202ENST00000380276 CUL2Q13617 745 aa24.09■■□□□ 1.45
U2AF1-202ENST00000380276 TEAD4Q15561 434 aa24.09■■□□□ 1.45
U2AF1-202ENST00000380276 CBWD6Q4V339 395 aa24.09■■□□□ 1.45
U2AF1-202ENST00000380276 CBWD3Q5JTY5 395 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms